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Molecular BiologyNucleic Acids Research
Peer-reviewed journal article

Surface-driven RNA-refolding by the OB-fold proteins of the Trypanosoma brucei editosome

Christin Voigt, Mateusz Dobrychłop, Elisabeth M. Kruse, Anna Czerwoniec, Joanna M. Kasprzak, Patrycja Bytner, Cristian Del CampoiD, W.‐Matthias LeederiD, Janusz Marek BujnickiiD, H. Ulrich GöringeriD

Abstract

RNA editing in African trypanosomes represents an RNA-processing reaction that generates functional mitochondrial transcripts from sequence-deficient pre-mRNAs. The reaction is catalyzed by a macromolecular protein complex known as the editosome. Editosomes have been demonstrated to execute RNA-chaperone activity to overcome the highly folded nature of pre-edited substrate mRNAs. The molecular basis of this activity is unknown. Here we test five OB-fold proteins of the editosome as potential candidates. We show that the different proteins interact by hetero-oligomerization and we demonstrate that all proteins execute RNA-chaperone activity. Activity differences correlate with the surface areas of the proteins and map predominantly to the intrinsically disordered subdomains of the polypeptides. To provide a structural context for our findings we present a coarse-grained model of the editosome. The model suggests that an inner core of catalytically active editosome components is separated from an outer shell of IDP-domains that act as RNA-remodeling sites.

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