Sign in
BioinformaticsBioinformatics
Peer-reviewed journal article

CRISPR-RT: A web service for designing CRISPR-C2c2 crRNA with improved target specificity

Houxiang Zhu, Emily Richmond, Chun LiangiD

Abstract

CRISPR-Cas systems have been successfully applied in genome editing. Recently, the CRISPR-C2c2 system has been reported as a tool for RNA editing. Here we describe CRISPR-RT (CRISPR RNA-Targeting), the first web service to help biologists design the crRNA with improved target specificity for the CRISPR-C2c2 system. CRISPR-RT allows users to set up a wide range of parameters, making it highly flexible for current and future research in CRISPR-based RNA editing. CRISPR-RT covers major model organisms and can be easily extended to cover other species. CRISPR-RT will empower researchers in RNA editing. It is available at http://bioinfolab.miamioh.edu/CRISPR-RT.

02 /Specification & Classification

Click any tag to browse matching papers

Reproducibility ledger

Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.

Sign in to file a reproducibility report.

Similarity Map
SelectedSame fieldCross-field
THISKim '22Wong '15Hoberecht '22Abudayyeh '16Hwang '18Jaskula-Ran '16
68% semantic matchMolecular Biology
Y. Bill Kim, Elizabeth B. Pierce, Michael Brown+14 more·bioRxiv·Dec 13, 2022· 5 citations