medRxivGenetic & Genomic MedicinePreprint
PD-L1-linked spatial decoupling of tumour-immune interactions in EBV-positive DLBCL
Axel KünstneriD, Matthias Kümmel, Anke FähnrichiD, Stefanie DereriD, Annika RaschdorfiD, Hanno Maximilian WitteiD, Yamil MalujeiD, Benedikt Faerber, Thies Rösner, Lisa Michelson, Friederike Stiller, Mona Maria Merz, Veronica BernardiD, Stephanie Stoelting, Daniel KolbeiD, Wolfgang PeteriD, Hartmut Merz, Nikolas von Bubnoff, Alfred Christian Feller, Hauke S. BuschiD, Philipp LohneisiD, Niklas GebaueriD
Abstract
EBV-positive diffuse large B-cell lymphoma (DLBCL) is an aggressive lymphoma enriched in elderly patients, in which PD-L1 genomic gains cooperate with viral signalling to promote immune escape. However, the spatial mechanisms by which PD-L1 reshapes the tumour microenvironment remain unresolved. Here, we integrate genomic profiling with spatial transcriptomics, spatial proteomics, and single-cell RNA sequencing to resolve the tumour-immune architecture of EBV-positive DLBCL. PD-L1 gain tumours exhibit a striking decoupling of immune proximity and immune engagement: T cells accumulate in close proximity to tumour cells yet direct tumour-immune contact is largely absent. Tumour boundaries are enriched for cancer-associated fibroblasts and display transcriptional signatures of metabolic immune suppression, while tumour-proximal T cells exhibit pronounced exhaustion. Together, these findings reveal a PD-L1-driven spatial immune evasion architecture that permits immune infiltration while enforcing multilayered suppression through fibroblast-mediated exclusion, metabolic constraint, and T-cell dysfunction, ultimately preventing effective anti-tumour immunity in EBV-positive DLBCL.
- organism: human
- assay: spatial transcriptomics
- research focus: cell-cell communication
- approach: statistical model
- Citations
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