eLifeGenomicsPeer-reviewed journal article
Single Cell Transcriptional Signatures of the Human Placenta in Term and Preterm Parturition
Roger Piqué-RegiiD, Roberto J. RomeroiD, Adi Laurentiu TarcaiD, Edward D. SendleriD, Yi Xu, Valeria Garcia‐FloresiD, Yaozhu Leng, Francesca LucaiD, Sonia S. HassaniD, Nardhy Gomez‐LopeziD
Abstract
More than 135 million births occur each year; yet, the molecular underpinnings of human parturition in gestational tissues, and in particular the placenta, are still poorly understood. The placenta is a complex heterogeneous organ including cells of both maternal and fetal origin, and insults that disrupt the maternal-fetal dialogue could result in adverse pregnancy outcomes such as preterm birth. There is limited knowledge of the cell type composition and transcriptional activity of the placenta and its compartments during physiologic and pathologic parturition. To fill this knowledge gap, we used scRNA-seq to profile the placental villous tree, basal plate, and chorioamniotic membranes of women with or without labor at term and those with preterm labor. Significant differences in cell type composition and transcriptional profiles were found among placental compartments and across study groups. For the first time, two cell types were identified: 1) lymphatic endothelial decidual cells in the chorioamniotic membranes, and 2) non-proliferative interstitial cytotrophoblasts in the placental villi. Maternal macrophages from the chorioamniotic membranes displayed the largest differences in gene expression (e.g. NFKB1) in both processes of labor; yet, specific gene expression changes were also detected in preterm labor. Importantly, several placental scRNA-seq transcriptional signatures were modulated with advancing gestation in the maternal circulation, and specific immune cell type signatures were increased with labor at term (NK-cell and activated T-cell) and with preterm labor (macrophage, monocyte, and activated T-cell). Herein, we provide a catalogue of cell types and transcriptional profiles in the human placenta, shedding light on the molecular underpinnings and non-invasive prediction of the physiologic and pathologic parturition.\n\nOne sentence summaryThe common molecular pathway of parturition for both term and preterm spontaneous labor is characterized using single cell gene expression analysis of the human placenta.
- organism: human
- assay: scRNA-seq
- research focus: cell type annotation
- research focus: differential expression
- research focus: gene regulatory network inference
- research focus: database / resource
- approach: statistical model
- Citations
- 322
- FWCI
- 25.68
- Field percentile
- top 1%
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