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bioRxivBiophysics

Self-assembly of polymer-encased lipid nanodiscs and membrane protein reconstitution

B. Sahoo, T. Genjo, K. Maharana, A. Ramamoorthy

PDFDOIPreprint

Abstract

The absence of detergent and curvature makes nanodiscs to be excellent membrane mimetics. The lack of structural and mechanistic model of polymer-encapsulated lipid-nanodiscs limits their use to study the structure, dynamics and function of membrane proteins. In this study, we parametrized and optimized the coarse-graining (CG) bead-mapping for two differently charged and functionalized copolymers, namely styrene-maleic acid (SMAEA) and polymethacrylate (PMAQA), for the Martini force-field framework and showed nanodisc formation ( View larger version (55K): org.highwire.dtl.DTLVardef@ae71c6org.highwire.dtl.DTLVardef@af961borg.highwire.dtl.DTLVardef@1a7e6c3org.highwire.dtl.DTLVardef@1f4a9a_HPS_FORMAT_FIGEXP M_FIG C_FIG

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