bioRxivGenomicsPreprint
Protein tyrosine phosphatase receptor type D - A convergent risk gene for MDD, BPD, and ADHD and regulator of dopaminergic neuroplasticity in reward associated circuits; A multivariate GWAS, brain tissue and cell type enrichment, and gene finemapping
Abstract
Major depressive disorder (MDD), bipolar disorder (BPD), and attention-deficit hyperactivity disorder (ADHD), are prevalent, highly heritable psychiatric disorders with significant degrees of genetic overlap. Using open-sourced summary statistics from the Psychiatric Genomics Consortium and 1000 Genomes European reference panel, we utilize a plethora of statistical frameworks to estimate shared genetic liability across MDD, BPD, and ADHD. We observed significant enrichment of latent genetic variables in dopamine neurons, and identify protein tyrosine phosphatase receptor delta (PTPRD), as a candidate gene. Literature review and gene fine-mapping suggest that PTPRD indirectly regulates DAT transporter surface trafficking and neuronal excitability. We propose that the loss of PTPRDs D1 phosphatase domain results in hyperactivated tropomyosin receptor kinase B (TrkB) and rearranged during transfection proto-oncogene tyrosine-protein kinase receptor (RET) signaling in dopamine neurons, potentiating excessive downstream phosphorylation and activation of VAV2, ERK1/2, and PKC. We hypothesize that these mechanisms contribute to the significantly altered reward-related behaviors such as cocaine-conditioned place preference, cocaine self-administration, motivation for cocaine, and goal oriented behavior that are consistently observed across PTPRD KO/inhibition mice studies. With the inclusion of literature review, we present the first integrated multivariate genetic and mechanistic analysis aimed to identify pleiotropic, cell type-specific mechanisms driving psychiatric comorbidity at the biochemical level.
- organism: human
- assay: GWAS summary statistics
- research focus: GWAS / association mapping
- research focus: fine-mapping
- approach: statistical model
- Citations
- 0
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Comprehensive exploration of the genetic contribution of the dopaminergic and serotonergic pathways to psychiatric disorders
Judit Cabana‐Domínguez, Bàrbara Torrico, … Bru Cormand·Translational PsychiatryPeer-reviewed·Jan 10, 2022
- Mouse model of atypical DAT deficiency syndrome uncovers dopamine dysfunction associated with parkinsonism and psychiatric disease
Freja Herborg, Lisa K. Konrad, … Ulrik Gether·bioRxiv·Aug 17, 2023
- The pleiotropic contribution of genes in dopaminergic and serotonergic pathways to addiction, aggression, and related behavioural traits
Ester Antón-Galindo, Judit Cabana‐Domínguez, … Noèlia Fernàndez-castillo A·medRxiv·May 3, 2023
- Neuroanatomical substrates in Parkinson's Disease psychosis and their association with serotonergic receptor gene expression: A coordinate-based meta-regression analysis.
Sara Pisani, Brandon Gunasekera, … Sagnik Bhattacharyya·Neuroscience & Biobehavioral ReviewsPeer-reviewed·Feb 10, 2023
- Genome-wide association study of REM sleep behavior disorder in Parkinson's disease
Yuri Ludwig Sosero, Karl Heilbron, … Ziv Gan‐Or·npj Parkinson s DiseasePeer-reviewed·Sep 25, 2025
- Lack of Cdk5 activity is involved on Dopamine Transporter expression and function: Evidences from an animal model of Attention-Deficit Hyperactivity Disorder
Fernández Guillermo, Krapacher Favio, … Paglini María Gabriela·bioRxiv·Mar 19, 2021