bioRxivBioengineering
3-D Vascularized Breast Cancer Model to Study the Role of Osteoblast in Formation of a Pre-Metastatic Niche
R. Rimal, P. B. Desai, A. B. Marquez, K. Sieg, Y. Marquardt, S. Singh
Abstract
Breast cancer cells (BCCs) preferentially metastasize to bone. It is known that BCCs remotely primes the distant bone site prior to metastasis. However, the reciprocal influence of bone cells on the primary tumor is relatively overlooked. Here, to study the bone-tumor paracrine influence, a tri-cellular 3-D vascularized breast cancer tissue (VBCTs) model is engineered which comprised MDA-MB231, a triple-negative breast cancer cells (TNBC), fibroblasts, and endothelial cells. The VBCTs are indirectly co-cultured with osteoblasts (OBs), thereby constituting a complex quad-cellular tumor progression model. MDA-MB231 alone and in conjunction with OBs led to abnormal vasculature and reduced vessel density but enhanced VEGF production. A total of 1476 significantly upregulated and 775 downregulated genes are identified in the VBCTs exposed to OBs. HSP90N, CYCS, RPS27A, and EGFR are recognized as upregulated hub-genes. Kaplan Meier plot shows HSP90N to have a significant outcome in TNBC patient survivability. Furthermore, compared to cancer tissues without vessels, gene analysis recognized 1278 significantly upregulated and 566 downregulated genes in VBCTs. DKK1, CXCL13, C3 protein and BMP4 are identified to be downregulated hub genes in VBCTs. Together, a multi-cellular breast cancer model and culture protocols are established to study pre-metastatic events in the presence of OBs.
- organism: human
- assay: bulk RNA-seq
- research focus: cell type annotation
- research focus: differential expression
- approach: experimental assay
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Perivascular tenascin C triggers sequential activation of macrophages and endothelial cells to generate a pro-metastatic vascular niche in the lungs
T. Hongu, M. Pein, … T. Oskarsson·bioRxiv·Mar 30, 2021
- Targeting tumor-stromal interactions in triple-negative breast cancer using a human vascularized micro-tumor model
S. J. Hachey, C. J. Hatch, … C. C. Hughes·bioRxiv·Sep 6, 2023
- Osteoblasts Exert a Pro-Tumorigenic Effect on Breast Cancer Spheroids Through CXCL5/CXCR2 Signaling In 2D And 3D Bone Mimetic Cultures
Sarah Nano, Syeda Masooma Naqvi, … Glen L. Niebur·bioRxiv·Nov 26, 2025
- Tumoral hypoxic extracellular vesicles foster a protective microenvironment in triple-negative breast cancer
Bianca Cruz Pachane, Pedro Henrique Teixeira Bottaro, … Heloísa Sobreiro Selistre-de-Araújo·Journal of Extracellular BiologyPeer-reviewed·Sep 1, 2025
- Biofunctional matrix models reveal mineral-dependent mechanoregulation of bone metastatic breast cancer
S. Choi, M. A. Whitman, … C. Fischbach·bioRxiv·Jun 29, 2022
- A novel mechanobiological model of bone metastasis reveals that mechanical stimulation inhibits the pro-osteoclastogenic effects of breast cancer cells
V. Kumar, S. M. Naqvi, … L. McNamara·bioRxiv·Sep 19, 2022