bioRxivMicrobiology
Gut Microbiota predicts Healthy Late-life Aging in Male Mice
S. Ke, S. J. Mitchell, M. R. MacArthur, A. E. Kane, D. A. Sinclair, E. M. Venable, K. S. Chadaideh, R. N. Carmody, F. Grodstein, J. R. Mitchell, Y.-Y. Liu
Abstract
Calorie restriction (CR) extends lifespan and retards age-related chronic diseases in most species. There is growing evidence that the gut microbiota has a pivotal role in host health and age-related pathological conditions. Yet, it is still unclear how CR and the gut microbiota are related to healthy aging. Here we report findings from a small longitudinal study of male C57BL/6 mice maintained on either ad libitum or mild (15%) CR diets from 21 months of age and tracked until natural death. We demonstrate that CR results in a significant reduction in frailty index (FI), a well-established indicator of aging. We observed significant alterations in bacterial load, diversity, and compositional patterns of the mouse gut microbiota during the aging process. Interrogating the FI-related microbial features using machine learning techniques, we show that gut microbial signatures from 21-month-old mice can predict the healthy aging of 30-month-old mice with reasonable accuracy. This study deepens our understanding of the links between CR, gut microbiota, and frailty in the aging process of mice.
- organism: mouse
- assay: metagenomics
- research focus: cell type annotation
- research focus: differential expression
- research focus: gene regulatory network inference
- approach: machine learning (classical)
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