Author

A. Avihingsanon

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Evolutionary Biology· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Assay:whole-genome sequencing· 2 Organism:bacteria (other)· 1 Research Focus:drug response / drug discovery· 1 Approach:experimental assay· 1 Organism:human· 1 Approach:statistical model· 1 Research Focus:variant calling· 1

Frequent Co-Authors

C. Loiseau· 2 shared M. Ballif· 2 shared M. Egger· 2 shared M. Reinhard· 2 shared M. Yotebieng· 2 shared S. Borrell· 2 shared S. Gagneux· 2 shared A. Abimiku· 1 shared

Activity by Year

2018-2020 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 43 mutual co-author links

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2 shared papersEvolutionary Biology

C. Loiseau

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2 papers

Recent·Most cited

HIV coinfection is associated with low fitness rpoB variants in rifampicin-resistant Mycobacterium tuberculosis

C. Loiseau, D. Brites, M. Reinhard, K. Zuercher, S. Borrell, M. Ballif, L. Fenner, H. Cox, L. K. Rutaihwa, R. J. Wilkinson, M. Yotebieng, E. J. Carter, A. Abimiku, O. Marcy, E. Gotuzzo, , S. Gagneux

The paper analyzes drug-resistant Mtb genomes from HIV coinfected and HIV negative patients, finding that HIV coinfected patients have more low fitness rpoB variants in rifampicin-resistant strains.

bioRxiv · Jul 20, 2020Evolutionary Biology

Whole genome sequencing for drug resistance profile prediction in Mycobacterium tuberculosis

S. M. Gygli, P. M. Keller, M. Ballif, N. Blöchliger, R. Hömke, M. Reinhard, C. Loiseau, C. Ritter, P. Sander, S. Borrell, J. C. Loo, A. Avihingsanon, J. Gnokoro, M. Yotebieng, M. Egger, , E. C. Böttger

This study uses whole genome sequencing to predict drug resistance profiles in M. tuberculosis isolates, achieving high sensitivity and specificity compared to phenotypic testing.

bioRxiv · Aug 28, 2018Microbiology