A. T. M. Hubbard

This study examines how prior selection with trimethoprim affects collateral resistance and evolvability in uropathogenic E. coli to other UTI antibiotics.

The paper analyzes the pangenome dynamics of Enterobacteriaceae from environmental sources, finding that plasmids carry more AMR genes and are influenced by niche and geography rather than phylogeny.

The paper identifies a novel hemA mutation causing a small colony variant phenotype in E. coli, associated with auxotrophy for hemin and impaired biofilm formation.

This study evaluates how sequencing depth affects taxonomic composition and AMR gene detection in metagenomic samples, finding that higher depth is needed for AMR gene richness.