spARC Recovers Human Glioma Spatial SignalingNetworks with Graph Filtering
Manik Razdan Kuchroo, Danielle F. Miyagishima, Holly R. Steach, Abhinav Godavarthi, Yutaka Takeo, Phan Q. Duy, Tanyeri Barak, Zeynep Erson-Omay, Scott E. Youlten, Ketu Mishra-Gorur, Jennifer A. Moliterno, Declan McGuone, Murat Günel, Smita Krishnaswamy
The paper introduces spARC, a method to recover spatial signaling networks in gliomas, revealing an Osteopontin-CD44 interaction enriched in grade IV astrocytomas.
bioRxiv · Aug 24, 2022 · PreprintBioinformatics