Author

Abinash Padhi

University of Chicago

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioengineering· 1 Immunology· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Research Focus:drug response / drug discovery· 1 Organism:human· 1 Assay:imaging· 1 Research Focus:protein folding & dynamics· 1 Assay:protein sequence· 1

Frequent Co-Authors

Savaş TayiD· 3 shared Gabriel Mercado-Vasquez· 2 shared Junjie XiaiD· 2 shared Yiyu Deng· 2 shared Aly Azeem KhaniD· 1 shared Andrew WangiD· 1 shared Betul CelikeriD· 1 shared Bijentimala KeishamiD· 1 shared

Activity by Year

2025-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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3 shared papersImmunology

Savaş TayORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Spatial proximity sequencing maps developmental dynamics in the germinal center

Huili Wang, Junjie Xia, Peer Mohamed Suhail Mujibur Rahman, Bijentimala Keisham, Abinash Padhi, Yiyu Deng, Yan Li, Luke F. Vistain, Sarah Kim, Gabriel Mercado-Vasquez, Aly Azeem Khan, Marcus R. Clark, Savaş Tay

This paper introduces Sprox-seq, a multi-omic technique that maps protein interactions and mRNA in human germinal centers, revealing distinct B cell maturation pathways and spatially-enriched immune regulatory complexes.

Cell · Jul 16, 2026Peer-reviewedImmunology

Massively multiplexed microfluidics maps combinatorial andsequential antibiotic responses in 3D

Yoon Jeong, Gabriel Mercado-Vasquez, Abinash Padhi, Yiyu Deng, Madhumitha Prakash, Jonathan M. Matthews, Sefika Ozcan, Erdal Toprak, Savaş Tay

The paper introduces a microfluidic system to study antibiotic responses in 3D cultures, revealing synergy, antagonism, and order-dependent drug efficacy.

bioRxiv · Oct 30, 2025 · PreprintBioengineering

Accurate processing of ultra-short immune signals by singlemacrophages

Gabriel Mercado-Vásquez, James V. Vizzard, Betul Celiker, Junjie Xia, Andrew Wang, Abinash Padhi, Savaş Tay

This study shows single macrophages can accurately detect and respond to short-lived immune signals through receptor cooperativity and pathway variability.

bioRxiv · Oct 26, 2025 · PreprintSystems Biology