Author

Ahmad Osman

Fluent (United States)

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Genomics· 3

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:experimental assay· 2 Assay:scRNA-seq· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1 Organism:Drosophila· 1 Organism:human· 1

Frequent Co-Authors

Aaron A. May-ZhangiD· 2 shared Chris D’AmatoiD· 2 shared Corey E. HayfordiD· 2 shared Jacob S. A. IshibashiiD· 2 shared Jesse Q. ZhangiD· 2 shared Kristina M. FontaneziD· 2 shared Pabodha HettigeiD· 2 shared Robert H. Meltzer· 2 shared

Activity by Year

2014-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 36 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersGenomics

Aaron A. May-ZhangORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Intrinsic molecular identifiers enable robust molecular counting in single-cell sequencing

Kristina M. Fontanez, Yigal Agam, Sophia Bevans, Aaron A. May-Zhang, Corey E. Hayford, Yi Xue, Jacob S. A. Ishibashi, Rachael Komuhendo, Lucas Yoder, Pabodha Hettige, Hannah Rickner, Jesse Q. Zhang, Ahmad Osman, Chris D’Amato, Trinity Smithers, , Robert H. Meltzer

The paper introduces PIPseq V, a single-cell RNA sequencing method using Intrinsic Molecular Identifiers (IMIs) to improve transcript counting and reduce biases compared to traditional UMIs.

bioRxiv · Oct 4, 2024 · PreprintGenomics

Microfluidics-free single-cell genomics with templated emulsification

Iain C. Clark, Kristina M. Fontanez, Robert H. Meltzer, Yi Xue, Corey E. Hayford, Aaron A. May-Zhang, Chris D’Amato, Ahmad Osman, Jesse Q. Zhang, Pabodha Hettige, Jacob S. A. Ishibashi, Cyrille L. Delley, Daniel W. Weisgerber, Joseph M. Replogle, Marco Jost, , Adam R. Abate

The paper introduces PIP-seq, a microfluidics-free method for single-cell RNA sequencing that enables high-throughput, scalable, and flexible processing of samples.

Nature Biotechnology · Mar 6, 2023Peer-reviewedGenomics

Genome-wide Identification of Zero Nucleotide Recursive Splicing in Drosophila

Michael O Duff, Sara Olson, Xintao Wei, Ahmad Osman, Alex Plocik, Mohan Bolisetty, Susan Celniker, Brenton Graveley

The paper identifies 196 zero nucleotide exon ratchet points in 115 Drosophila genes using RNA-Seq data, revealing recursive splicing as a common and conserved mechanism.

bioRxiv · Jun 11, 2014Genomics