Author

Alessandra Livigni

MRC Centre for Regenerative Medicine

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Developmental Biology· 2 Systems Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Assay:bulk RNA-seq· 2 Research Focus:gene regulatory network inference· 2 Organism:mouse· 2 Approach:statistical model· 2 Research Focus:cell type annotation· 1 Assay:DNA methylation· 1 Organism:human· 1

Frequent Co-Authors

Aicha Haji Ali· 1 shared Alena BoosiD· 1 shared Anahí Binagui-CasasiD· 1 shared Andreas BlutkeiD· 1 shared Ángela Moreno AnguitaiD· 1 shared Ankit SinhaiD· 1 shared Annette FeuchtingeriD· 1 shared Atilgan YilmaziD· 1 shared

Activity by Year

2016-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 36 mutual co-author links

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1 shared paperDevelopmental Biology

Aicha Haji Ali

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Author profile →

3 papers

Recent·Most cited

Capture of Post-Pluripotency Human Neuromesodermal and Neural Tube Axial Stem Cell States

Dolunay Kelle, Enes Ugur, Ejona Rusha, Dmitry Shaposhnikov, Alessandra Livigni, Sandra Horschitz, Mahnaz Davoudi, Atilgan Yilmaz, Kilian Winiger, Anahí Binagui-Casas, Ángela Moreno Anguita, Xiaolong Yang, Mazène Hochane, Andreas Blutke, Judith Bushe, , Micha Drukker

The paper captures two human axial stem cell states and identifies regulatory networks and mechanisms underlying their maintenance and differentiation.

bioRxiv · Mar 26, 2024 · PreprintDevelopmental Biology

Evolutionary Origin of Vertebrate OCT4/POU5 Functions in Supporting Pluripotency

Woranop Sukparangsi, Elena Morganti, Molly Lowndes, Hélène Mayeur, Melanie Bianca Weisser, Fella Hammachi, Hanna Peradziryi, Fabian V Roske, Jurriaan Hölzenspies, Alessandra Livigni, Benoît G. Godard, Fumiaki Sugahara, Shigeru Kuratani, Guillermo Montoya, Stephen Frankenberg, , Joshua M. Brickman

This study traces the evolutionary origin of OCT4/POU5 functions in supporting pluripotency across vertebrates using sequence analysis and functional studies in mouse ESCs.

Nature Communications · Sep 21, 2022Peer-reviewedDevelopmental Biology

Petri Net-Based Graphical and Computational Modelling of Biological Systems

Alessandra Livigni, Laura O’Hara, Marta E. Polak, Tim Angus, Lee B. Smith, Tom C. Freeman

The paper presents a methodology for constructing biological pathway models from literature using a graphical system and simulating their dynamics.

bioRxiv · Jun 22, 2016 · PreprintSystems Biology