Author

Alton Etheridge

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Molecular Biology· 2 Genomics· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 3 Approach:experimental assay· 2 Organism:human· 2 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1 Approach:statistical model· 1

Frequent Co-Authors

David J. GalasiD· 3 shared Muneesh TewariiD· 2 shared Ryan M. SpengleriD· 2 shared Amanda Courtright· 1 shared Andrea J. BarczakiD· 1 shared Anna Heintz‐BuschartiD· 1 shared Anne KayseniD· 1 shared Annika Jane Goicochea· 1 shared

Activity by Year

2017-2019 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 23 mutual co-author links

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3 shared papersMolecular Biology

David J. GalasORCID

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3 papers

Recent·Most cited

Phospho-sRNA-seq reveals extracellular mRNA/lncRNA fragments as potential biomarkers in human plasma

Maria Dolores Giraldez, Ryan M. Spengler, Alton Etheridge, Annika Jane Goicochea, Missy K. Tuck, Sung Won Choi, David J. Galas, Muneesh Tewari

The paper introduces phospho-sRNA-seq to detect fragmented mRNA and lncRNA in plasma, identifying tissue-specific exRNA signatures as potential biomarkers in bone marrow transplant patients.

The EMBO Journal · May 3, 2019Peer-reviewedMolecular Biology

Isolation of nucleic acids from low biomass samples: detection and removal of sRNA contaminants

Anna Heintz‐Buschart, Dilmurat Yusuf, Anne Kaysen, Alton Etheridge, Joëlle V. Fritz, Patrick May, Carine E. de Beaufort, Bimal Babu Upadhyaya, Anubrata Ghosal, David J. Galas, Paul Wilmes

The paper identifies and removes small RNA contaminants from microRNA extraction kits, showing their presence in human plasma samples and published datasets.

BMC Biology · May 14, 2018Peer-reviewedMolecular Biology

Accuracy, Reproducibility And Bias Of Next Generation Sequencing For Quantitative Small RNA Profiling: A Multiple Protocol Study Across Multiple Laboratories

MD Giraldez, Ryan M. Spengler, Alton Etheridge, PM Godoy, Andrea J. Barczak, Srimeenakshi Srinivasan, PL De Hoff, Kahraman Tanrıverdi, Amanda Courtright, Shu Lu, Joseph A. Khoory, R. Rubio, David H. Baxter, Tom A. P. Driedonks, HPJ Buermans, , Muneesh Tewari

This study evaluates the accuracy, reproducibility, and bias of small RNA-seq across five protocols and nine labs, finding protocol-specific bias that can be mitigated with adapters and computational corrections.

bioRxiv · May 17, 2017 · PreprintGenomics