Author

B. E. Wolfe

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 7 Ecology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 6 Research Focus:ecology & biodiversity· 3 Research Focus:host-pathogen & immune response· 3 Assay:whole-genome sequencing· 3 Assay:metagenomics· 2 Approach:statistical model· 2 Organism:bacteria (other)· 1 Research Focus:cell type annotation· 1

Frequent Co-Authors

R. J. Dutton· 3 shared C. Cosetta· 2 shared E. C. Pierce· 2 shared J. C. Little· 2 shared J. Tannous· 2 shared L. M. Sanchez· 2 shared M. Morin· 2 shared N. P. Keller· 2 shared

Activity by Year

2017-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 23 mutual co-author links

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3 shared papersMicrobiology

R. J. Dutton

Mutual co-authors in cluster

Author profile →

8 papers

Recent·Most cited

Genomics and synthetic community experiments uncover the key metabolic roles of acetic acid bacteria in sourdough starter microbiomes

H. B. Rappaport, N. P. J. Senewiratne, S. K. Lucas, B. E. Wolfe, A. M. Oliverio

This paper uses genomics and synthetic community experiments to show that acetic acid bacteria (AAB) significantly influence sourdough starter function through metabolic diversity and strain-specific effects.

bioRxiv · Apr 11, 2024Microbiology

A phylogenomic perspective on interspecific competition

N. Louw, B. E. Wolfe, L. H. Uricchio

The paper explores how discordant gene trees can reveal phylogenetic signal in interspecific interactions using Penicillium genomes and interaction data.

bioRxiv · May 11, 2023Ecology

Metabolomics of bacterial-fungal pairwise interactions reveal conserved molecular mechanisms

G. T. Luu, J. C. Little, E. C. Pierce, M. Morin, C. A. Ertekin, B. E. Wolfe, O. Baars, R. J. Dutton, L. M. Sanchez

The paper identifies fungal-produced small molecules in bacterial-fungal co-cultures, revealing their role in microbial interactions and highlighting fungi's contribution to microbiomes.

The Analyst · Jan 1, 2023Peer-reviewedMicrobiology

Species interactions promote parallel evolution of global transcriptional regulators in a widespread Staphylococcus species

C. Cosetta, B. Niccum, N. Kamkari, M. Dente, M. Podniesinski, B. E. Wolfe

This study shows that species interactions drive the evolution of global transcriptional regulators in Staphylococcus xylosus, leading to increased phenotypic and genomic diversity when co-cultured with the yeast Debaryomyces hansenii.

bioRxiv · Dec 19, 2022 · PreprintMicrobiology

Fungal antibiotics control bacterial community diversity in the cheese rind microbiome

J. Tannous, C. Cosetta, M. T. Drott, T. A. Rush, P. E. Abraham, R. J. Giannone, N. P. Keller, B. E. Wolfe

This study shows that fungal antibiotics, specifically pseurotins, regulate bacterial community diversity in cheese rind microbiomes by controlling bacterial abundance and composition.

bioRxiv · Nov 26, 2022 · PreprintMicrobiology

From iron to antibiotics: Identification of conserved bacterial-fungal interactions across diverse partners

E. C. Pierce, M. Morin, J. C. Little, R. B. Liu, J. Tannous, N. P. Keller, B. E. Wolfe, K. Pogliano, L. M. Sanchez, R. J. Dutton

This study identifies conserved bacterial-fungal interactions across 16 bacterial-fungal pairs, revealing that fungi modulate iron and biotin availability and produce uncharacterized antibiotics.

bioRxiv · Mar 19, 2020Microbiology

Strain-level diversity impacts cheese rind microbiome assembly and function

B. A. Niccum, E. K. Kastman, N. Kfoury, A. Robbat, B. E. Wolfe

The paper shows that strain-level variation in core microbiomes affects their assembly and function, leading to differences in cheese rind properties.

bioRxiv · Jun 7, 2019Microbiology

Extensive Horizontal Gene Transfer in Cheese-Associated Bacteria

K. S. Bonham, B. E. Wolfe, R. J. Dutton

The paper identifies extensive horizontal gene transfer in cheese rind microbiomes, finding 4,844 protein-coding genes in 200 putative transferred regions, many involved in siderophore acquisition.

bioRxiv · May 23, 2017Microbiology