Author

R. J. Dutton

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Microbiology· 8 Biochemistry· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:experimental assay· 7 Research Focus:host-pathogen & immune response· 5 Organism:bacteria (other)· 3 Research Focus:drug response / drug discovery· 2 Research Focus:gene regulatory network inference· 2 Assay:metabolomics· 2 Assay:metagenomics· 2 Approach:statistical model· 2

Frequent Co-Authors

E. C. Pierce· 5 shared M. Morin· 4 shared B. E. Wolfe· 3 shared C. C. Saak· 2 shared J. C. Little· 2 shared L. M. Sanchez· 2 shared A. D. Grossman· 1 shared A. J. Morrison· 1 shared

Activity by Year

2017-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 14 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

5 shared papersMicrobiology

E. C. Pierce

Mutual co-authors in cluster

Author profile →

9 papers

Recent·Most cited

O-antigen biosynthesis mediates evolutionary trade-offs within a simple community

T. C. J. Spencer-Drakes, A. Sarabia, G. Heussler, E. C. Pierce, M. Morin, S. Villareal, R. J. Dutton

This study identifies O-antigen biosynthesis as a key factor mediating evolutionary trade-offs in host-phage and host-fungal interactions within a cheese microbial community.

bioRxiv · Nov 15, 2023Microbiology

Metabolomics of bacterial-fungal pairwise interactions reveal conserved molecular mechanisms

G. T. Luu, J. C. Little, E. C. Pierce, M. Morin, C. A. Ertekin, B. E. Wolfe, O. Baars, R. J. Dutton, L. M. Sanchez

The paper identifies fungal-produced small molecules in bacterial-fungal co-cultures, revealing their role in microbial interactions and highlighting fungi's contribution to microbiomes.

The Analyst · Jan 1, 2023Peer-reviewedMicrobiology

Longitudinal, Multi-platform Metagenomics Yields a High-quality Genomic Catalog and Guides an In Vitro Model for Cheese Communities

C. C. Saak, E. C. Pierce, C. B. Dinh, D. Portik, R. Hall, M. Ashby, R. J. Dutton

The paper generates a longitudinal metagenomic dataset and an in vitro model of cheese rind microbiomes to study microbial succession and functional dynamics.

bioRxiv · Jul 1, 2022Microbiology

Higher-order interactions shape microbial interactions as microbial community complexity increases

M. A. Morin, A. J. Morrison, M. J. Harms, R. J. Dutton

The paper investigates how microbial interactions change with community complexity, finding that higher-order interactions emerge and most conserved interactions are additive.

bioRxiv · May 19, 2022Microbiology

From iron to antibiotics: Identification of conserved bacterial-fungal interactions across diverse partners

E. C. Pierce, M. Morin, J. C. Little, R. B. Liu, J. Tannous, N. P. Keller, B. E. Wolfe, K. Pogliano, L. M. Sanchez, R. J. Dutton

This study identifies conserved bacterial-fungal interactions across 16 bacterial-fungal pairs, revealing that fungi modulate iron and biotin availability and produce uncharacterized antibiotics.

bioRxiv · Mar 19, 2020Microbiology

Native Electrospray-based Metabolomics Enables the Detection of Metal-binding Compounds

A. T. Aron, D. Petras, R. Schmid, J. M. Gauglitz, I. Buttel, L. Antelo, H. Zhi, C. C. Saak, K. P. Malarney, E. Thines, R. J. Dutton, M. Raffatellu, P. C. Dorrestein

The paper introduces a method to detect metal-binding compounds using native electrospray ionization mass spectrometry with metal infusion and molecular networking.

bioRxiv · Oct 30, 2019 · PreprintBiochemistry

Mobile-CRISPRi: Enabling Genetic Analysis of Diverse Bacteria

J. M. Peters, B.-M. Koo, R. Patino, G. E. Heussler, C. C. Hearne, Y. Inclan, J. S. Hawkins, C. H. S. Lu, M. M. Harden, H. Osadnik, J. E. Peters, J. N. Engel, R. J. Dutton, A. D. Grossman, C. A. Gross, O. S. Rosenberg

The paper introduces Mobile-CRISPRi, a CRISPRi system for non-model bacteria, demonstrating its use in analyzing gene function and antibiotic resistance in human pathogens.

bioRxiv · May 5, 2018Microbiology

Changes in the genetic requirements for microbial interactions with increasing community complexity

M. Morin, E. C. Pierce, R. J. Dutton

The paper investigates how E. coli's genetic requirements change in microbial communities of varying complexity using RB-TnSeq and RNASeq.

bioRxiv · Mar 28, 2018Microbiology

Extensive Horizontal Gene Transfer in Cheese-Associated Bacteria

K. S. Bonham, B. E. Wolfe, R. J. Dutton

The paper identifies extensive horizontal gene transfer in cheese rind microbiomes, finding 4,844 protein-coding genes in 200 putative transferred regions, many involved in siderophore acquisition.

bioRxiv · May 23, 2017Microbiology