Author

B. Stewart

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 2 Ecology· 1 Immunology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 3 Approach:deep learning· 2 Research Focus:differential expression· 2 Organism:human· 2 Assay:metagenomics· 2 Organism:mouse· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1

Frequent Co-Authors

A. E. White· 1 shared A. M. Cabello· 1 shared A. M. Hynes· 1 shared A. M. Segall· 1 shared A. Peretti· 1 shared A. S. Woolf· 1 shared A. Varsani· 1 shared B. A. Ta'ala· 1 shared

Activity by Year

2019-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 16 mutual co-author links

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Curved chords = mutual co-authorship

1 shared paperEcology

A. E. White

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

Nitrogen fixation in mesoscale eddies of the North Pacific Subtropical Gyre: patterns and mechanisms

M. Dugenne, M. R. Gradoville, M. J. Church, B. Barone, S. T. Wilson, U. Sheyn, M. Harke, K. M. Björkman, N. J. Hawco, A. M. Hynes, F. Ribalet, A. E. White, D. M. Karl, E. F. DeLong, S. T. Dyhrman, , J. Zehr

The paper investigates elevated nitrogen fixation rates in mesoscale eddies of the North Pacific Subtropical Gyre, finding that anticyclones support higher diazotroph abundances due to phosphate limitation relief, while physical dynamics influence other taxa.

Global Biogeochemical Cycles · Apr 18, 2023Peer-reviewedEcology

Three-dimensional imaging and single-cell transcriptomics of the human kidney implicate perturbation of lymphatics in alloimmunity

D. J. Jafree, B. Stewart, M. Kolatsi-Joannou, B. Davis, H. Mitchell, L. G. Russell, L. Marinas del Rey, W. J. Mason, B. I. Lee, L. Heptinstall, G. Pomeranz, D. Moulding, L. Wilson, T. Wickenden, S. Malik, , D. A. Long

This study uses 3D imaging and single-cell RNA-sequencing to analyze human kidney lymphatics, revealing structural and transcriptional changes in rejecting kidney transplants.

bioRxiv · Oct 28, 2022 · PreprintImmunology

Exposure to nitric oxide drives transition to differential culturability in Mycobacterium tuberculosis

S. M. Glenn, B. Gap-Gaupool, E. Milburn, O. Turapov, M. Crosatti, J. Hincks, B. Stewart, J. Bacon, S. L. Kendall, M. I. Voskuil, O. Riabova, N. Monakhova, J. Green, S. J. Waddell, V. Makarov, G. V. Mukamolova

This study shows that nitric oxide exposure leads to the formation of Rpf-dependent differentially culturable Mycobacterium tuberculosis subpopulations, which are resistant to standard diagnostics and treatments.

bioRxiv · Sep 28, 2021 · PreprintMicrobiology

Discovery of several thousand highly diverse circular DNA viruses

M. J. Tisza, D. V. Pastrana, N. L. Welch, B. Stewart, A. Peretti, G. J. Starrett, Y.-Y. S. Pang, S. R. Krishnamurthy, P. A. Pesavento, D. H. McDermott, P. M. Murphy, J. L. Whited, B. Miller, J. M. Brenchley, S. P. Rosshart, , C. B. Buck

The paper identifies and characterizes thousands of new circular DNA viruses from animal samples using a bioinformatics pipeline and artificial neural networks.

bioRxiv · Sep 17, 2019Microbiology