Author

C. L. Peterson

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Biochemistry· 5 Bioengineering· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:chromatin & epigenetic regulation· 5 Approach:experimental assay· 4 Assay:ChIP-seq· 3 Approach:biophysical modeling· 2 Organism:yeast· 2 Research Focus:cell signaling & trafficking· 1 Research Focus:cell type annotation· 1 Approach:contrastive learning· 1

Frequent Co-Authors

A. S. Baier· 2 shared S. Watanabe· 2 shared A. Schmid· 1 shared A. T. Moreno· 1 shared C. Lewis· 1 shared E. M. Leith· 1 shared E. Oberbeckmann· 1 shared H. Eldardiry· 1 shared

Activity by Year

2018-2022 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 10 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersBiochemistry

A. S. Baier

Mutual co-authors in cluster

Author profile →

6 papers

Recent·Most cited

Prediction of Electric Fields Induced by Transcranial Magnetic Stimulation in the Brain using a Deep Encoder-Decoder Convolutional Neural Network

M. Tashli, M. S. Alam, J. Gong, C. Lewis, C. L. Peterson, H. Eldardiry, J. Atulasimha, R. L. Hadimani

This paper develops a deep convolutional neural network to predict induced electric fields from TMS in real-time using MRI data, achieving high accuracy with peak signal-to-noise ratios of 32.83dB and 28.01dB.

bioRxiv · Oct 27, 2022 · PreprintBioengineering

H2A.Z deposition by SWR1C involves multiple ATP-dependent steps

J. Fan, A. T. Moreno, A. S. Baier, J. J. Loparo, C. L. Peterson

This study identifies three ATP-dependent phases in H2A.Z deposition by SWR1C using single-molecule and ensemble methods, revealing a priming step and ATP concentration-dependent release of H2A/H2B.

bioRxiv · Jan 11, 2022Biochemistry

Dual engagement of the nucleosomal acidic patches is essential for deposition of histone H2A.Z by SWR1C

A. S. Baier, N. Gioacchini, P. Eek, E. M. Leith, S. Tan, C. L. Peterson

This study shows that SWR1C requires both nucleosomal acidic patches for H2A.Z deposition, revealing a 'pincer-like' engagement mechanism and a conserved arginine-rich motif in Swc5.

bioRxiv · Dec 8, 2021Biochemistry

Ruler elements in chromatin remodelers set nucleosome array spacing and phasing

E. Oberbeckmann, V. Niebauer, S. Watanabe, L. Farnung, M. Moldt, A. Schmid, P. Cramer, C. L. Peterson, S. Eustermann, K.-P. Hopfner, P. Korber

The paper identifies a ruler element in chromatin remodelers that determines nucleosome spacing and phasing in Saccharomyces cerevisiae.

bioRxiv · Feb 28, 2020Biochemistry

SIR proteins create compact heterochromatin fibers

S. Swygert, S. Senapati, M. Bolukbasi, S. Wolfe, S. Lindsay, C. L. Peterson

This study reconstitutes SIR heterochromatin fibers in budding yeast and shows they are highly compact, requiring H4K16 and Sir3-Sir4 interactions.

bioRxiv · Jun 13, 2018Biochemistry

Transient kinetic analysis of SWR1C-catalyzed H2A.Z deposition unravels the impact of nucleosome dynamics and the asymmetry of stepwise histone exchange

R. K. Singh, S. Watanabe, O. Bilsel, C. L. Peterson

This study uses transient kinetic analysis to reveal how SWR1C catalyzes H2A.Z deposition, showing asymmetry in ATP-dependent dimer exchange and nucleosome dynamics.

bioRxiv · Apr 19, 2018Biochemistry