Author

M. S. Alam

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 3 Bioengineering· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 4 Research Focus:chromatin & epigenetic regulation· 2 Research Focus:drug response / drug discovery· 2 Organism:bacteria (other)· 1 Research Focus:cell signaling & trafficking· 1 Approach:contrastive learning· 1 Approach:deep learning· 1 Assay:DNA methylation· 1

Frequent Co-Authors

H. M. A. Hameed· 2 shared T. Zhang· 2 shared A. Lenhart· 1 shared B. Yusuf· 1 shared C. Fang· 1 shared C. L. Peterson· 1 shared C. Lewis· 1 shared C. Li· 1 shared

Activity by Year

2020-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 10 mutual co-author links

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2 shared papersMicrobiology

H. M. A. Hameed

Mutual co-authors in cluster

Author profile →

5 papers

Recent·Most cited

A CRISPR-Nonhomologous End-Joining-based strategy for rapid and efficient gene disruption in Mycobacterium abscessus

S. Zeng, Y. Ju, M. S. Alam, Z. Lu, H. M. A. Hameed, L. Li, X. Tian, C. Fang, X. Fang, J. Ding, X. Wang, J. Hu, S. Wang, T. Zhang

This paper introduces a CRISPR-NHEJ strategy for efficient gene disruption in Mycobacterium abscessus and shows that homologous recombination and single-strand annealing components are required for NHEJ repair.

bioRxiv · Jan 29, 2024Microbiology

Prediction of Electric Fields Induced by Transcranial Magnetic Stimulation in the Brain using a Deep Encoder-Decoder Convolutional Neural Network

M. Tashli, M. S. Alam, J. Gong, C. Lewis, C. L. Peterson, H. Eldardiry, J. Atulasimha, R. L. Hadimani

This paper develops a deep convolutional neural network to predict induced electric fields from TMS in real-time using MRI data, achieving high accuracy with peak signal-to-noise ratios of 32.83dB and 28.01dB.

bioRxiv · Oct 27, 2022 · PreprintBioengineering

A new demethylase gene OsDML4 involved in high temperature induced floury endosperm formation in rice

Y. Yan, C. Li, Z. Liu, J.-J. Zhuang, J.-R. Kong, Z.-K. Yang, J. Yu, M. S. Alam, C.-C. Ruan, H.-M. Zhang, J.-H. Xu

This study identifies OsDML4 as a demethylase gene whose knockout under high temperature causes floury endosperm by altering DNA methylation and gene expression in rice.

bioRxiv · Jan 20, 2022 · PreprintPlant Biology

Sterilizing Effects of Novel Regimens Containing TB47, Clofazimine and Linezolid in a Murine Model of Tuberculosis.

Y. Wei, B. Yusuf, W. Shuai, T. Xirong, H. M. A. Hameed, L. Zhili, G. Chiwala, M. S. Alam, G. M. Cook, D. A. Maslov, Z. Nanshan, T. Zhang

This study evaluates novel oral tuberculosis regimens containing TB47, clofazimine, and linezolid, showing fast-acting sterilizing activity and no relapse in a mouse model.

bioRxiv · Apr 4, 2021Microbiology

Insecticide resistance status of Aedes aegypti in Bangladesh

H. M. Al-Amin, F. T. Johora, S. R. Irish, M. R. H. Hossainey, L. Vizcaino, K. K. Paul, W. A. Khan, R. Haque, M. S. Alam, A. Lenhart

This study assesses insecticide resistance in Aedes aegypti in Bangladesh, finding high resistance to permethrin and multiple resistance mechanisms.

Parasites & Vectors · Dec 14, 2020Peer-reviewedMicrobiology