Author

Catherine Baugher

Ohio UniversityPrimary ORCID profile (0000-0003-1545-6863 · 1 paper)Unclaimed ORCID profile · follow to get notified of new preprints

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Same name, identified by ORCID

Catherine BaugheriD1 paper · National Institutes of Health

Biology Disciplines

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Bioinformatics· 1 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Assay:Hi-C· 2 Organism:mouse· 2 Assay:ChIP-seq· 1 Research Focus:clustering· 1 Research Focus:gene regulatory network inference· 1 Research Focus:genome assembly· 1 Research Focus:spatial domain detection· 1

Frequent Co-Authors

Ana PomboiD· 2 shared Lonnie R. WelchiD· 2 shared Trenton J. DavisiD· 2 shared Alexander KukaleviD· 1 shared Andrea M. ChiarielloiD· 1 shared Antonio ScialdoneiD· 1 shared Carlo AnnunziatellaiD· 1 shared Christoph J. ThiemeiD· 1 shared

Activity by Year

2020-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 39 mutual co-author links

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2 shared papersMolecular Biology

Ana PomboORCID

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2 papers

Recent·Most cited

Multiplex-GAM: genome-wide identification of chromatin contacts yields insights not captured by Hi-C

Robert A. Beagrie, Christoph J. Thieme, Carlo Annunziatella, Catherine Baugher, Yingnan Zhang, Markus Schueler, Alexander Kukalev, Rieke Kempfer, Andrea M. Chiariello, Simona Bianco, Yichao Li, Trenton J. Davis, Antonio Scialdone, Lonnie R. Welch, Mario Nicodemi, Ana Pombo

The paper introduces multiplex-GAM, a ligation-free method for genome-wide chromatin contact mapping, showing it detects different strong contacts compared to Hi-C, particularly involving active genomic regions.

Nature Methods · Jun 19, 2023Peer-reviewedMolecular Biology

Single-Cell Analysis of the 3D Topologies of Genomic Loci Using Genome Architecture Mapping

Lonnie R. Welch, Catherine Baugher, Yingnan Zhang, Trenton J. Davis, William F. Marzluff, Joshua D. Welch, Ana Pombo

The paper introduces a single-cell analysis of Genome Architecture Mapping (GAM) data, revealing intercellular heterogeneity in 3D chromatin topology and developing a geometric model for nuclear structure.

bioRxiv · Feb 10, 2020 · PreprintBioinformatics

Catherine Baugher · henhao