Author

Carlo Annunziatella

Istituto Nazionale di Fisica NucleareORCID 0000-0001-7175-4254Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Developmental Biology· 1 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Assay:ChIP-seq· 2 Approach:experimental assay· 2 Research Focus:gene regulatory network inference· 2 Organism:mouse· 2 Research Focus:differential expression· 1 Assay:DNA methylation· 1 Research Focus:genome assembly· 1 Assay:Hi-C· 1

Frequent Co-Authors

Andrea M. ChiarielloiD· 2 shared Mario NicodemiiD· 2 shared Simona BiancoiD· 2 shared Alexander KukaleviD· 1 shared Ana PomboiD· 1 shared Andrea EspositoiD· 1 shared Antonio ScialdoneiD· 1 shared Bernd Timmermann· 1 shared

Activity by Year

2019-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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2 shared papersMolecular Biology

Andrea M. ChiarielloORCID

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2 papers

Recent·Most cited

Multiplex-GAM: genome-wide identification of chromatin contacts yields insights not captured by Hi-C

Robert A. Beagrie, Christoph J. Thieme, Carlo Annunziatella, Catherine Baugher, Yingnan Zhang, Markus Schueler, Alexander Kukalev, Rieke Kempfer, Andrea M. Chiariello, Simona Bianco, Yichao Li, Trenton J. Davis, Antonio Scialdone, Lonnie R. Welch, Mario Nicodemi, Ana Pombo

The paper introduces multiplex-GAM, a ligation-free method for genome-wide chromatin contact mapping, showing it detects different strong contacts compared to Hi-C, particularly involving active genomic regions.

Nature Methods · Jun 19, 2023Peer-reviewedMolecular Biology

Preformed Chromatin Topology Assists TranscriptionalRobustness of Shh during Limb Development

Christina Paliou, Philine Guckelberger, Robert Schöpflin, Verena Heinrich, Andrea Esposito, Andrea M. Chiariello, Simona Bianco, Carlo Annunziatella, Johannes Helmuth, Stefan A. Haas, Ivana Jerković, Norbert Brieske, Lars Wittler, Bernd Timmermann, Mario Nicodemi, , Guillaume Andrey

The paper shows that preformed chromatin topology supports robust Shh transcription during limb development, with CTCF and ZRS alleles influencing enhancer-promoter communication.

Proceedings of the National Academy of Sciences · May 30, 2019Peer-reviewedDevelopmental Biology