Trenton J. Davis

The Chromobacterium Volatilome is Strongly Influenced by Growth on Liquid versus Solid Media

This study compares the volatilomes of Chromobacterium species grown on liquid and solid media, finding that media type has the largest impact on volatile organic compound profiles.

Multiplex-GAM: genome-wide identification of chromatin contacts yields insights not captured by Hi-C

The paper introduces multiplex-GAM, a ligation-free method for genome-wide chromatin contact mapping, showing it detects different strong contacts compared to Hi-C, particularly involving active genomic regions.

Single-Cell Analysis of the 3D Topologies of Genomic Loci Using Genome Architecture Mapping

The paper introduces a single-cell analysis of Genome Architecture Mapping (GAM) data, revealing intercellular heterogeneity in 3D chromatin topology and developing a geometric model for nuclear structure.