Author

Clifford J. Jolly

New York Consortium in Evolutionary Primatology

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 4

Signature Assays, Organisms & Methods

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Organism:non-human primate· 3 Approach:statistical model· 3 Assay:whole-genome sequencing· 3 Approach:deep learning· 1 Assay:DNA methylation· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1

Frequent Co-Authors

Jeffrey RogersiD· 4 shared Amanda Dawn MeliniD· 3 shared Jane E. Phillips‐ConroyiD· 3 shared Mareike C. JaniakiD· 3 shared Sascha KnaufiD· 3 shared Alejandro ValenzuelaiD· 2 shared Alphonse Zaramody· 2 shared Andrew C. KitcheneriD· 2 shared

Activity by Year

2018-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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Curved chords = mutual co-authorship

4 shared papersGenomics

Jeffrey RogersORCID

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

The landscape of tolerated genetic variation in humans and primates

Hong Chao Gao, Tobias Hamp, Jeffrey M. Ede, Joshua G. Schraiber, Jeremy F. McRae, Moriel Singer‐Berk, Yanshen Yang, Anastasia S. D. Dietrich, Petko P. Fiziev, Lukas F. K. Kuderna, Laksshman Sundaram, Yibing Wu, Aashish N. Adhikari, Yair Field, Chen Chen, , Kyle Kai‐How Farh

The paper uses primate genetic data to predict human variant pathogenicity with a deep learning classifier trained on 4.3 million common missense variants.

Science · Jun 1, 2023Peer-reviewedGenomics

A global catalog of whole-genome diversity from 233 primate species

Lukas F. K. Kuderna, Hong Chao Gao, Mareike C. Janiak, Martin Kuhlwilm, Joseph Daniel Orkin, Thomas M Bataillon, Shivakumara Manu, Alejandro Valenzuela, Juraj Bergman, Marjolaine Marie C. Rousselle, Felipe Ennes Silva, Lídia Águeda, Julie Marie Blanc, Marta Ortova Gut, Dorien de Vries, , Tomàs Marquès‐Bonet

This study presents whole-genome data from 233 primate species, revealing patterns of genetic diversity, mutation rates, and recurrent missense mutations across primate clades.

Science · Jun 1, 2023Peer-reviewedGenomics

High-altitude adaptation and incipient speciation in geladas

Kenneth L. Chiou, Mareike C. Janiak, India A. Schneider‐Crease, Sharmi Sen, Ferehiwot Ayele, Idrissa S. Chuma, Sascha Knauf, Alemayehu Lemma, Anthony V. Signore, Anthony M. D’Ippolito, Belayneh Abebe, Abebaw Azanaw Haile, Fanuel Kebede, Peter J. Fashing, Nga Nguyen, , Noah Snyder‐Mackler

This study identifies genomic and karyotypic changes in geladas that may contribute to high-altitude adaptation and speciation.

Nature Ecology & Evolution · Mar 24, 2022Peer-reviewedGenomics

Evolution of DNA methylation in Papio baboons

Tauras P. Vilgalys, Jeffrey Rogers, Clifford J. Jolly, Baboon Genome Analysis, Sayan Mukherjee, Jenny Tung

The paper profiles DNA methylation in Papio baboons to study evolutionary changes and finds that methylation divergence mirrors genetic structure and is influenced by selection in functionally relevant regions.

Molecular Biology and Evolution · Dec 4, 2018Peer-reviewedGenomics