Author

E. A. J. Fischer

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 4

Signature Assays, Organisms & Methods

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Research Focus:host-pathogen & immune response· 3 Approach:statistical model· 3 Organism:bacteria (other)· 1 Approach:benchmark study· 1 Research Focus:benchmarking· 1 Organism:chicken / avian· 1 Approach:experimental assay· 1 Assay:metagenomics· 1

Frequent Co-Authors

A. J. Stegeman· 2 shared F. C. Velkers· 2 shared J. A. Wagenaar· 2 shared A. Bossers· 1 shared A. L. Zomer· 1 shared A. M. Dame-Korevaar· 1 shared A. N. van der Spek· 1 shared A. R. Hall· 1 shared

Activity by Year

2020-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 18 mutual co-author links

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2 shared papersMicrobiology

A. J. Stegeman

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Author profile →

4 papers

Recent·Most cited

Defining minimal selective concentrations of amoxicillin, doxycycline and enrofloxacin in broiler-derived cecal fermentations by phenotype, microbiome and resistome

A. Swinkels, E. A. J. Fischer, L. Korving, N. Kusters, J. A. Wagenaar, A. L. Zomer

The paper determines the minimal selective concentrations of three antibiotics in broiler cecal fermentations to identify thresholds for antimicrobial resistance selection.

bioRxiv · Nov 21, 2023 · PreprintMicrobiology

Comparing the transmission of carbapenemase-producing and extended-spectrum beta-lactamase-producing Escherichia coli between broiler chickens.

N. Dankittipong, J. B. Alderliesten, J. Van den Broek, A. M. Dame-Korevaar, M. S. Brouwer, F. C. Velkers, A. Bossers, C. J. de Vos, J. A. Wagenaar, A. J. Stegeman, E. A. J. Fischer

This study compares the transmission of carbapenemase-producing (CPE) and extended-spectrum beta-lactamase (ESBL)-producing Escherichia coli between broiler chickens, finding CPE transmission rates were 52-68% lower than ESBL and chloramphenicol-resistant strains.

bioRxiv · Feb 21, 2023Microbiology

Adaptation, spread and transmission of SARS-CoV-2 in farmed minks and related humans in the Netherlands

L. Lu, R. S. Sikkema, F. C. Velkers, D. F. Nieuwenhuijse, E. A. J. Fischer, P. A. Meijer, N. Bouwmeester-Vincken, A. Rietveld, M. C. A. Wegdam-Blans, P. Tolsma, M. Koppelman, L. A. M. Smit, R. W. Hakze-van der Honing, W. H. M. van der Poel, A. N. van der Spek, , M. P. G. Koppelman

This study investigates SARS-CoV-2 transmission between minks and humans in the Netherlands, finding that some mutations led to faster and wider spread among mink farms.

bioRxiv · Jul 13, 2021 · PreprintMicrobiology

Estimating plasmid conjugation rates: a new computational tool and a critical comparison of methods

J. S. Huisman, F. Benz, S. J. N. Duxbury, J. A. G. M. de Visser, A. R. Hall, E. A. J. Fischer, S. Bonhoeffer

The paper introduces a new computational tool for estimating plasmid conjugation rates and compares existing methods, showing biases due to population dynamics and growth differences.

bioRxiv · Mar 9, 2020Microbiology