Author

Emily Eugster

Van Andel Institute

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 2

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Research Focus:differential expression· 2 Organism:human· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:cell-cell communication· 1 Approach:deep learning· 1 Assay:DNA methylation· 1

Frequent Co-Authors

Hsiao-yun Milliron· 2 shared Benjamin K. JohnsoniD· 1 shared Catherine E. KeltyiD· 1 shared David Sokol· 1 shared Edgars GrinsiD· 1 shared Eric J. KortiD· 1 shared Greg Marco· 1 shared Hui SheniD· 1 shared

Activity by Year

2020-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 25 mutual co-author links

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2 shared papersGenomics

Hsiao-yun Milliron

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2 papers

Recent·Most cited

High-coverage allele-resolved single-cell DNA methylation profiling by scDEEP-mC reveals cell lineage, X-inactivation state, and replication dynamics

Nathan J. Spix, Walid Abi Habib, Zhouwei Zhang, Emily Eugster, Hsiao-yun Milliron, David Sokol, KwangHo Lee, Paula A. Nolte, Jamie L. Endicott, Kelly F. Krzyzanowski, Toshinori Hinoue, Jacob Morrison, Benjamin K. Johnson, Wanding Zhou, Hui Shen, Peter W. Laird

The paper introduces scDEEP-mC, a single-cell DNA methylation profiling method, and shows it can identify cell types, X-inactivation states, and replication dynamics with high coverage.

Nature Communications · Jul 7, 2025Peer-reviewedGenomics

The inflammasome of circulatory collapse: single cell analysis of survival on extracorporeal life support.

Eric J. Kort, Matthew J. Weiland, Edgars Grins, Emily Eugster, Hsiao-yun Milliron, Catherine E. Kelty, Nabin Manandhar Shrestha, Tomasz A. Timek, Marzia Leacche, Stephen J. Fitch, Theodore J. Boeve, Greg Marco, Michael G. Dickinson, Penny Wilton, Stefan V. Jovinge

The paper uses single-cell RNA sequencing to identify CD8+/CD52+ NKT cells as a survival predictor in patients on VA-ECLS, showing their inverse correlation with IL-6 production.

bioRxiv · Mar 7, 2020 · PreprintGenomics