Author

F. Meric-Bernstam

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cancer Biology· 3 Immunology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 4 Assay:whole-exome sequencing· 3 Assay:bulk RNA-seq· 2 Research Focus:cell type annotation· 2 Organism:human· 2 Research Focus:benchmarking· 1 Research Focus:clustering· 1 Research Focus:database / resource· 1

Frequent Co-Authors

A. Srivastava· 2 shared B. Davis-Dusenbery· 2 shared C. Frech· 2 shared C. J. Bult· 2 shared D. A. Dean· 2 shared J. A. Moscow· 2 shared J. DiGiovanna· 2 shared J. H. Doroshow· 2 shared

Activity by Year

2018-2021 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersCancer Biology

A. Srivastava

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4 papers

Recent·Most cited

Reconstructing mutational lineages in breast cancer by multi-patient-targeted single cell DNA sequencing

N. Navin, J. Leighton, M. Hu, E. Sei, F. Meric-Bernstam

This study develops a multi-patient-targeted scDNA-seq method to profile informative mutations in breast cancer and identifies mutational lineages across multiple tumors.

bioRxiv · Nov 16, 2021Cancer Biology

PDXNet Portal: Patient-Derived Xenograft model, data, workflow, and tool discovery

S. Koc, M. W. Lloyd, J. Grover, S. Seepo, S. Lakshmi Subramanian, M. Ray, C. Frech, J. DiGiovanna, P. Webster, S. Neuhauser, A. Srivastava, X. Yi Woo, B. J. Sanderson, B. White, P. Lott, , J. H. Chuang

The paper introduces the PDXNet Portal, a centralized resource for PDX models and data, offering analysis workflows and facilitating cancer research collaboration.

bioRxiv · Oct 15, 2021Cancer Biology

Systematic Establishment of Robustness and Standards in Patient-Derived Xenograft Experiments and Analysis

Y. A. Evrard, A. SRIVASTAVA, J. Randjelovic, S. Arunachalam, C. J. Bult, H. Chen, L. Chen, M. Davies, S. Davies, B. Davis-Dusenbery, J. DiGiovanna, L. Ding, J. H. Doroshow, B. Fang, C. Frech, , J. Morris

The paper tests the reproducibility of PDX drug responses and sequence results across different labs using standardized protocols and workflows.

bioRxiv · Oct 2, 2019Cancer Biology

Haplotype Analysis of the TRB Locus by TCRB Repertoire Sequencing

T. J. Looney, D. Y. Duose, G. Lowman, E. Linch, J. Hajjar, D. Topacio-Hall, M. Xu, J. Zheng, A. Alshawa, C. Tapia, B. Stephen, L. Wang, F. Meric-Bernstam, L. Miller, A. Glavin, , A. Naing

The paper develops a long-read TCRB repertoire sequencing method to analyze TRBV polymorphism and identifies TRBV allele haplotypes in 81 Caucasians.

bioRxiv · Sep 28, 2018 · PreprintImmunology