Author

F. Pardo-Avila

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biophysics· 2 Biochemistry· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Organism:bacteria (other)· 2 Research Focus:protein folding & dynamics· 2 Assay:structural biology· 2 Research Focus:chromatin & epigenetic regulation· 1 Research Focus:drug response / drug discovery· 1 Organism:E. coli· 1 Research Focus:protein structure prediction· 1

Frequent Co-Authors

A. McGurk· 2 shared B. Hayes· 2 shared C. Gati· 2 shared E. H. Dao· 2 shared F. Aksit· 2 shared F. Poitevin· 2 shared H. DeMirci· 2 shared M. Liang· 2 shared

Activity by Year

2018-2018 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersBiophysics

A. McGurk

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3 papers

Recent·Most cited

The Shape of the Ribosome Exit Tunnel Affects Cotranslational Protein Folding

R. Kudva, P. Tian, F. Pardo-Avila, M. Carroni, R. B. Best, H. D. Bernstein, G. Von Heijne

The study shows that the geometry of the E. coli ribosome exit tunnel influences where proteins fold during translation, with larger domains folding deeper when tunnel space is available.

bioRxiv · Sep 25, 2018Biochemistry

Aminoglycoside ribosome interactions reveal novel conformational states at ambient temperature

M. E. O'Sullivan, F. Poitevin, R. G. Sierra, C. Gati, E. H. Dao, Y. Rao, F. Aksit, H. Ciftci, N. Corsepius, R. Greenhouse, B. Hayes, M. S. Hunter, M. Liang, A. McGurk, P. Mbgam, , H. DeMirci

This study examines aminoglycoside interactions with the bacterial 30S ribosome at ambient and cryogenic temperatures, revealing temperature-sensitive conformational changes and new structural states.

bioRxiv · Jul 19, 2018Biophysics

Structure of the 30S ribosomal decoding complex at ambient temperature

E. H. Dao, F. Poitevin, R. G. Sierra, C. Gati, Y. Rao, H. I. Ciftci, F. Aksit, A. McGurk, T. Obrinski, P. Mgbam, B. Hayes, C. de Lichtenberg, F. Pardo-Avila, N. Corsepius, L. Zhang, , H. DeMirci

The paper reports an ambient-temperature X-ray crystal structure of the Thermus thermophilus 30S ribosomal decoding complex, showing consistency with cryogenic structures but with minor conformational variations.

bioRxiv · Mar 9, 2018Biophysics