Author

H.-H. Lin

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 3 Biochemistry· 2 Biophysics· 1 Cancer Biology· 1 Immunology· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 7 Research Focus:cell signaling & trafficking· 5 Research Focus:host-pathogen & immune response· 5 Research Focus:cell type annotation· 4 Organism:human· 4 Assay:bulk RNA-seq· 2 Research Focus:development & morphogenesis· 2 Organism:E. coli· 2

Frequent Co-Authors

M. E. Farkas· 3 shared S. R. Taylor· 3 shared A. M. Deutschbauer· 1 shared A. Mukhopadhyay· 1 shared C. A. Adams· 1 shared C. Labriola· 1 shared C.-H. Hung· 1 shared C.-T. Liu· 1 shared

Activity by Year

2018-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 6 mutual co-author links

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3 shared papersImmunology

M. E. Farkas

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Author profile →

9 papers

Recent·Most cited

Assessing horizontal gene transfer in the rhizosphere of Brachypodium distachyon using fabricated ecosystems (EcoFABs)

S. Priya, S. Rossbach, T. Eng, P. Andeer, H.-H. Lin, J. Mortimer, T. Northen, A. Mukhopadhyay

This study demonstrates the use of EcoFABs to measure horizontal gene transfer frequency in the rhizosphere of Brachypodium distachyon, showing dependencies on plant stage, root exudates, donor cell numbers, and environmental stress.

bioRxiv · Mar 14, 2024 · PreprintMicrobiology

Impact of inoculation practices on microbiota assembly and community stability in a fabricated ecosystem

H.-H. Lin, M. Torres, C. A. Adams, P. F. Andeer, T. K. Owens, K. Zhalnina, L. K. Jabusch, H. K. Carlson, J. V. Kuehl, A. M. Deutschbauer, T. R. Northen, N. L. Glass, J. C. Mortimer

This study evaluates how different inoculation practices and harvesting times affect microbial community reproducibility in a fabricated ecosystem with Brachypodium distachyon.

bioRxiv · Jun 13, 2023Plant Biology

Macrophage Circadian Rhythms are Differentially Affected Based on Stimuli

S. S. L. Don, J. A. Mas-Rosario, H.-H. Lin, M. Nguyen, S. R. Taylor, M. E. Farkas

This study examines how macrophage polarization and cancer cell-conditioned media affect circadian rhythms in macrophages and cancer cells, revealing distinct circadian characteristics based on phenotype.

bioRxiv · Jul 1, 2021Immunology

Circadian Alterations Increase with Progression in a Patient-Derived Cell Culture Model of Breast Cancer

H.-H. Lin, S. R. Taylor, M. E. Farkas

The paper evaluates circadian rhythm alterations in a patient-derived breast cancer cell model as cells progress from normal to malignant states, finding deviations in clock gene oscillations.

bioRxiv · Jan 15, 2021Biochemistry

Nobiletin Affects Circadian Rhythms and Oncogenic Characteristics in a Cell-Dependent Manner

S. S. Lellupitiyage Don, K. L. Robertson, H.-H. Lin, C. Labriola, M. E. Harrington, S. R. Taylor, M. E. Farkas

This study shows nobiletin modulates circadian rhythms and anti-oncogenic effects differently across three cancer cell lines based on their baseline circadian rhythmicity.

bioRxiv · Jan 14, 2020Cancer Biology

Identification of Escherichia coli ClpAP in regulating susceptibility to type VI secretion system-mediated attack by Agrobacterium tumefaciens

H.-H. Lin, M. Yu, M. K. Sriramoju, S.-T. D. Hsu, C.-T. Liu, E.-M. Lai

The paper identifies ClpAP in E. coli as a factor influencing susceptibility to T6SS-mediated killing by A. tumefaciens.

bioRxiv · Aug 14, 2019Microbiology

Oncogenic and Circadian Effects of Small Molecules Directly and Indirectly Targeting the Core Circadian Clock

H.-H. Lin, K. Robertson, H. Bisbee, M. Farkas

This study examines how five small molecules, both direct and indirect circadian clock modulators, affect circadian rhythms and cellular behaviors in U2OS cells, finding that circadian period changes do not correlate with cell migration or proliferation.

bioRxiv · May 22, 2019Biochemistry

The ligand-mediated affinity of escort proteins determines the directionality of lipophilic cargo transport

Y.-Y. Cheng, Y.-F. Huang, H.-H. Lin, W.-S. W. Chang, P.-C. Lyu

The paper investigates how ligand-mediated affinity of escort proteins controls the directionality of lipophilic cargo transport using FABP and nanodiscs.

bioRxiv · Dec 7, 2018 · PreprintBiophysics

Bloodstream Infection with Extended-spectrum Beta-lactamase-producing Escherichia coli: the role of virulence genes

W.-T. Hung, M.-F. Cheng, F.-C. Tseng, Y.-S. Chen, S. S.-J. Lee, T.-H. Chang, H.-H. Lin, C.-H. Hung, J.-L. Wang

This study investigates the association between virulence genes and outcomes in patients with bloodstream infections caused by ESBL-producing E. coli, finding specific gene and sequence type associations with mortality.

bioRxiv · Jul 10, 2018Microbiology