Author

J. V. Kuehl

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 5 Plant Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 5 Assay:metagenomics· 4 Organism:bacteria (other)· 2 Research Focus:gene regulatory network inference· 2 Research Focus:host-pathogen & immune response· 2 Assay:whole-genome sequencing· 2 Research Focus:cell type annotation· 1 Organism:E. coli· 1

Frequent Co-Authors

A. M. Deutschbauer· 5 shared A. P. Arkin· 5 shared G. M. Zane· 2 shared H. K. Carlson· 2 shared J. D. Wall· 2 shared J.-M. Chandonia· 2 shared L. M. Lui· 2 shared M. N. Price· 2 shared

Activity by Year

2017-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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5 shared papersMicrobiology

A. M. Deutschbauer

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Author profile →

6 papers

Recent·Most cited

Genomic and environmental controls on Castellaniella biogeography in an anthropogenically disturbed subsurface

J. L. Goff, E. G. Szink, K. L. Durrence, L. M. Lui, T. N. Nielsen, J. V. Kuehl, K. A. Hunt, J.-M. Chandonia, J. Huang, M. P. Thorgersen, F. L. Poole, D. A. Stahl, R. Chakraborty, A. M. Deutschbauer, A. P. Arkin, M. W. W. Adams

This study investigates how genomic and environmental factors influence the distribution of Castellaniella species in a contaminated subsurface, identifying genetic mechanisms underlying their adaptation to stress.

bioRxiv · Feb 3, 2024 · PreprintMicrobiology

Impact of inoculation practices on microbiota assembly and community stability in a fabricated ecosystem

H.-H. Lin, M. Torres, C. A. Adams, P. F. Andeer, T. K. Owens, K. Zhalnina, L. K. Jabusch, H. K. Carlson, J. V. Kuehl, A. M. Deutschbauer, T. R. Northen, N. L. Glass, J. C. Mortimer

This study evaluates how different inoculation practices and harvesting times affect microbial community reproducibility in a fabricated ecosystem with Brachypodium distachyon.

bioRxiv · Jun 13, 2023Plant Biology

A simple, cost-effective and automation-friendly direct PCR approach for bacterial community analysis

F. Song, J. V. Kuehl, A. Chandran, A. P. Arkin

This paper introduces a direct PCR method for bacterial community analysis that is cheaper, faster, and more scalable than traditional DNA extraction methods.

bioRxiv · Mar 1, 2021Microbiology

Large-scale Genetic Characterization of a Model Sulfate Reducing Bacterium

V. V. Trotter, M. Shatsky, M. N. Price, T. R. Juba, G. M. Zane, K. P. De Leon, E. L. Majumder, Q. Gui, R. Ali, K. M. Wetmore, J. V. Kuehl, A. P. Arkin, J. D. Wall, A. M. Deutschbauer, J.-M. Chandonia, G. P. Butland

This study characterizes the genetic essentiality and conditional phenotypes of Desulfovibrio vulgaris Hildenborough using a transposon mutant library under various metabolic and stress conditions.

bioRxiv · Jan 13, 2021 · PreprintMicrobiology

Selective carbon sources influence the end-products of microbial nitrate respiration

H. K. Carlson, L. M. Lui, M. N. Price, A. E. Kazakov, A. V. Carr, J. V. Kuehl, T. K. Owens, T. Nielsen, A. P. Arkin, A. M. Deutschbauer

The paper investigates how different carbon sources affect the end-products of nitrate respiration in microbial communities from diverse environments.

bioRxiv · Nov 4, 2019Microbiology

Filling Gaps in Bacterial Amino Acid Biosynthesis Pathways with High-throughput Genetics

M. Price, G. M. Zane, J. V. Kuehl, R. A. Melnyk, J. D. Wall, A. M. Deutschbauer, A. P. Arkin

The paper identifies novel enzymes filling amino acid biosynthesis gaps in bacteria using genome-wide mutant fitness data, revealing previously unknown pathways for methionine, threonine, serine, and histidine synthesis.

bioRxiv · Sep 23, 2017Microbiology