Author

Holger Wenschuh

JPT Peptide Technologies (Germany)

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Immunology· 1

Signature Assays, Organisms & Methods

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Assay:proteomics· 2 Research Focus:cell type annotation· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:host-pathogen & immune response· 1 Organism:human· 1 Assay:imaging· 1

Frequent Co-Authors

Karsten SchnatbaumiD· 2 shared Ulf ReimeriD· 2 shared Andreas F. R. HühmeriD· 1 shared Andreas NitscheiD· 1 shared Andreas ThieliD· 1 shared Armin SoleymaniniyaiD· 1 shared Beate Kruse· 1 shared Bernard DelangheiD· 1 shared

Activity by Year

2025-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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2 shared papersBioinformatics

Karsten SchnatbaumORCID

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2 papers

Recent·Most cited

Learning the Unseen: Data-Augmented Deep Learning for PTM Discovery with Prosit-PTM

Wassim Gabriel, Daniel Paul Zolg, Victor Giurcoiu, Omar Osama Shouman, Polina Prokofeva, Florian Seefried, Florian P Bayer, Ludwig Lautenbacher, Armin Soleymaniniya, Karsten Schnatbaum, Johannes Zerweck, Tobias Knaute, Bernard Delanghe, Andreas F. R. Hühmer, Holger Wenschuh, , Mathias Wilhelm

This paper introduces Prosit-PTM, a deep learning model for PTM discovery that improves zero-shot prediction using a synthetic dataset and chemically-informed encoding.

bioRxiv · Nov 7, 2025 · PreprintBioinformatics

Aging and viral evolution impair immunity against dominant pan-coronavirus-reactive T cell epitope

Lucie Loyal, Karsten Jürchott, Ulf Reimer, Lil Meyer‐Arndt, Larissa Henze, Norbert Mages, Jak Kostrzanowski, Bernhard Reus, Maike Mangold, Beate Kruse, Manuela Dingeldey, Birgit Sawitzki, Janine Michel, Marica Grossegesse, Karsten Schnatbaum, , Andreas Thiel

The paper investigates how aging and viral mutations affect pan-coronavirus immunity, finding reduced T cell responses in older individuals and mutation-driven impact on humoral immunity.

European Journal of Immunology · Jul 1, 2025Peer-reviewedImmunology