Author

J. Borneman

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 2 Cancer Biology· 1 Physiology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 4 Approach:experimental assay· 3 Research Focus:host-pathogen & immune response· 3 Organism:mouse· 3 Assay:bulk RNA-seq· 2 Research Focus:differential expression· 2 Research Focus:clustering· 1 Organism:human· 1

Frequent Co-Authors

A. Hsiao· 2 shared A. Shawki· 2 shared J. Mitchell· 2 shared A. N. Santos· 1 shared A. Sayoc· 1 shared C. Ramakrishna· 1 shared D. F. McCole· 1 shared D. McCole· 1 shared

Activity by Year

2019-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 23 mutual co-author links

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2 shared papersPhysiology

A. Hsiao

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

Effect of Nivolumab therapy on Metastatic Lung Cancer in Human Microbiome

R. Kubba, S. Nguyen, J. Borneman, R. Pai, R. J. Evans

This study examines how nivolumab therapy affects the gut microbiome in lung cancer patients, finding a significant reduction in Megasphaera elsdenii levels.

bioRxiv · Jan 3, 2023 · PreprintCancer Biology

Diet High in Soybean Oil Increases Susceptibility to Colitis in Mice

S. P. Deol, P. Ruegger, G. Logan, A. Shawki, J. Li, J. Mitchell, J. Yu, V. Piamthai, S. H. Radi, J. Newman, O. Fiehn, D. McCole, M. G. Nair, A. Hsiao, J. Borneman, F. M. Sladek

This study shows that a soybean oil-rich diet increases colitis susceptibility in mice by altering HNF4, gut microbiota, and metabolites.

bioRxiv · Feb 8, 2021Physiology

Herpes Simplex Virus Infection, Acyclovir and IVIG Treatment All Independently Cause Gut Dysbiosis.

E. M. Cantin, C. Ramakrishna, S. Mendonca, P. Reugger, J. H. Kim, J. Borneman

This study shows HSV, ACV, and IVIG independently cause sex-biased gut dysbiosis in mice, with ACV reducing protective bacterial taxa linked to GVHD prevention in HSCT patients.

bioRxiv · Nov 20, 2019Microbiology

The Autoimmune Susceptibility Gene, PTPN2, Restricts Expansion of a Novel Mouse Adherent-Invasive E. coli

A. Shawki, R. Alvarez, M. R. Spalinger, P. M. Ruegger, A. Sayoc, A. N. Santos, P. Chatterjee, J. Mitchell, J. Macbeth, M. L. Tremblay, A. Hsiao, J. Borneman, D. F. McCole

This study shows PTPN2 deficiency in mice promotes expansion of a novel adherent-invasive E. coli that worsens colitis.

bioRxiv · Jul 22, 2019Microbiology