Author

J. Cnossen

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biophysics· 3

Signature Assays, Organisms & Methods

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Approach:deep learning· 2 Assay:imaging· 2 Approach:statistical model· 2 Organism:bacteria (other)· 1 Research Focus:dimensionality reduction· 1 Research Focus:drug response / drug discovery· 1 Approach:experimental assay· 1

Frequent Co-Authors

C. S. Smith· 2 shared A. M. Malinen· 1 shared C. de Visser· 1 shared C. Joo· 1 shared D. Dulin· 1 shared D. Kalisvaart· 1 shared E. Ostrofet· 1 shared F. S. Papini· 1 shared

Activity by Year

2021-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 19 mutual co-author links

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2 shared papersBiophysics

C. S. Smith

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3 papers

Recent·Most cited

Using splines for point spread function calibration atnon-uniform depths in localization microscopy

S. Korovin, D. Kalisvaart, S.-T. Hung, J. Cnossen, C. de Visser, C. S. Smith

This paper introduces a spline-based method for depth-dependent PSF calibration in localization microscopy, improving PSF accuracy and localization precision.

bioRxiv · Jan 24, 2024 · PreprintBiophysics

Quantitative parameters of bacterial RNA polymerase open-complex formation, stabilization and disruption on a consensus promoter

S. C. Bera, P. P. B. America, S. Maatsola, M. Seifert, E. Ostrofet, J. Cnossen, M. Spermann, F. S. Papini, M. Depken, A. M. Malinen, D. Dulin

The paper quantifies the kinetics of bacterial RNA polymerase open-complex formation, stabilization, and disruption on a consensus promoter using single-molecule magnetic tweezers.

bioRxiv · Oct 13, 2021Biophysics

Drift correction in localization microscopy using entropy minimization

J. Cnossen, T. J. Cui, C. Joo, C. S. Smith

This paper introduces an entropy minimization method to improve drift correction in localization microscopy, achieving 5x better precision than existing methods without fiducial markers.

bioRxiv · Mar 30, 2021Biophysics