Author

J. Cuperus

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Plant Biology· 4

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 4 Approach:experimental assay· 4 Organism:Arabidopsis· 3 Research Focus:gene regulatory network inference· 3 Assay:bulk RNA-seq· 2 Research Focus:differential expression· 2 Assay:ChIP-seq· 1 Research Focus:development & morphogenesis· 1

Frequent Co-Authors

C. Queitsch· 4 shared J. Tonnies· 2 shared S. Fields· 2 shared T. Jores· 2 shared A. K. Hempton· 1 shared A. P. Lanctot· 1 shared A. Romanowski· 1 shared B. L. R. Downing· 1 shared

Activity by Year

2020-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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4 shared papersPlant Biology

C. Queitsch

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Author profile →

4 papers

Recent·Most cited

Florigen-producing cells express FPF1-LIKE PROTEIN 1 that accelerates flowering and stem growth in long days with sunlight red/far-red ratio in Arabidopsis

H. Takagi, N. Lee, A. K. Hempton, S. Purushwani, M. Notaguchi, K. Yamauchi, K. Shirai, Y. Kawakatsu, S. Uehara, W. G. Albers, B. L. R. Downing, S. Ito, T. Suzuki, T. Matsuura, I. C. Mori, , T. Imaizumi

The paper identifies FLP1 as a gene expressed in FT-producing cells in Arabidopsis that promotes flowering and stem growth under long-day conditions.

bioRxiv · Apr 26, 2024 · PreprintPlant Biology

Cooperativity and additivity in plant enhancers

T. Jores, J. Tonnies, N. A. Mueth, A. Romanowski, S. Fields, J. Cuperus, C. Queitsch

This study investigates how plant enhancers integrate transcription factor activity, finding both cooperative and additive interactions in light-responsive enhancers.

bioRxiv · Nov 21, 2023Plant Biology

Synthetic Promoter Designs Enabled by a Comprehensive Analysis of Plant Core Promoters

T. Jores, J. Tonnies, T. Wrightsman, E. S. Buckler, J. Cuperus, S. Fields, C. Queitsch

The paper uses a massively parallel reporter assay to analyze plant promoters and designs synthetic promoters with high activity.

bioRxiv · Jan 7, 2021Plant Biology

A single cell view of the transcriptome during lateral root initiation in Arabidopsis thaliana

H. P. Gala, A. P. Lanctot, K. Jean-Baptiste, S. Guiziou, J. C. Chu, J. E. Zemke, W. George, C. Queitsch, J. Cuperus, J. Nemhauser

The paper uses single-cell RNA sequencing to study lateral root initiation in Arabidopsis, identifying new genes and cell populations involved in this process.

bioRxiv · Oct 2, 2020Plant Biology