Author

J. E. Rattray

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 5

Signature Assays, Organisms & Methods

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Approach:experimental assay· 5 Assay:metagenomics· 5 Research Focus:cell type annotation· 3 Research Focus:clustering· 2 Research Focus:ecology & biodiversity· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1

Frequent Co-Authors

A. Chakraborty· 3 shared A. MacDonald· 3 shared C. Li· 3 shared C. R. Hubert· 3 shared J. Webb· 3 shared M. Fowler· 3 shared C. Campbell· 2 shared C. Greening· 2 shared

Activity by Year

2019-2022 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 39 mutual co-author links

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3 shared papersMicrobiology

A. Chakraborty

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5 papers

Recent·Most cited

Bacterial anomalies in seabed sediments associated with deep water hydrocarbon seepage

C. Li, O. Adebayo, D. K. Ferguson, S. Wang, J. E. Rattray, M. Fowler, J. Webb, C. Campbell, N. Morrison, A. MacDonald, C. R. Hubert

This study uses 16S rRNA gene sequencing to identify bacterial anomalies in deep-sea sediments linked to hydrocarbon seepage, finding distinct microbial signatures associated with thermogenic and biogenic hydrocarbons.

bioRxiv · Oct 15, 2022 · PreprintMicrobiology

Geological processes mediate a subsurface microbial loop in the deep biosphere

D. Gittins, P.-A. Desiage, N. Morrison, J. E. Rattray, S. Bhatnagar, A. Chakraborty, J. Zorz, O. Horanszky, M. A. Cramm, J. Webb, A. MacDonald, M. Fowler, C. Campbell, C. R. Hubert

The paper investigates a subsurface microbial loop mediated by geological processes, showing thermophilic endospores migrate from deep oil reservoirs to the seabed and re-enter the geosphere through sedimentation.

bioRxiv · Oct 26, 2021 · PreprintMicrobiology

Extremely thermophilic endospores germinate and metabolise organic carbon in sediments heated to above 80°C

E. Bell, J. E. Rattray, K. Sloan, A. Sherry, G. Pilloni, C. R. Hubert

bioRxiv · Oct 10, 2021Microbiology

Thermogenic hydrocarbons fuel a redox stratified subseafloor microbiome in deep sea cold seep sediments

X. Dong, J. E. Rattray, D. C. Campbell, J. Webb, A. Chakraborty, O. Adebayo, S. Matthews, C. Li, M. Fowler, A. Macdonald, R. A. Groves, I. A. Lewis, S. H. Wang, D. Mayumi, C. Greening, C. R. J. Hubert

This study profiles microbial activities in deep sea cold seep sediments, revealing hydrocarbon oxidation pathways and their role in sustaining diverse microbial communities across redox gradients.

bioRxiv · Feb 2, 2020 · PreprintMicrobiology

Metabolic potential of uncultured bacteria and archaea associated with petroleum seepage in deep-sea sediments

X. DONG, C. Greening, J. E. Rattray, A. Chakraborty, M. Chuvochina, D. Mayumi, J. Dolfing, C. Li, J. M. Brooks, B. B. Bernard, R. A. Groves, I. A. Lewis, C. R. J. Hubert

This study investigates microbial energy and carbon acquisition strategies in deep-sea petroleum seeps using metagenomic analysis and geochemical data.

bioRxiv · Jan 28, 2019Microbiology