Author

J. Flannery

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 3

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Assay:whole-genome sequencing· 2 Research Focus:cell type annotation· 1 Organism:chicken / avian· 1 Approach:experimental assay· 1 Research Focus:genome assembly· 1 Organism:human· 1 Research Focus:metabolism & bioenergetics· 1

Frequent Co-Authors

G. L. Freimanis· 2 shared A. Corla· 1 shared A. D. Ferguson· 1 shared A. Law· 1 shared A. R. Burns· 1 shared A. Tse· 1 shared B. Shih· 1 shared C. Batten· 1 shared

Activity by Year

2019-2021 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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2 shared papersMicrobiology

G. L. Freimanis

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Author profile →

3 papers

Recent·Most cited

A random priming amplification method for whole genome sequencing of SARS-CoV-2 and H1N1 influenza A virus.

K. Chrzastek, C. Tennakoon, D. Bialy, G. L. Freimanis, J. Flannery, H. Shelton

This paper compares random priming amplification methods for whole genome sequencing of SARS-CoV-2 and H1N1 influenza A virus, finding that the SISPA method is most effective for non-targeted sequencing.

bioRxiv · Jun 25, 2021 · PreprintMicrobiology

A novel strain of lumpy skin disease virus causes clinical disease in cattle in Hong Kong

J. Flannery, B. Shih, I. R. Haga, M. Ashby, A. Corla, S. King, G. L. Freimanis, N. Polo, A. Tse, C. Brackman, J. Chan, P. Pun, A. D. Ferguson, A. Law, S. J. Lycett, , P. Beard

This paper reports the first detection of lumpy skin disease virus in Hong Kong, identifying a novel strain genetically distinct from previous outbreaks.

bioRxiv · Apr 20, 2021Microbiology

Gut feelings begin in childhood: how the gut metagenome links to early environment, caregiving, and behavior

J. Flannery, K. Stagaman, A. R. Burns, R. J. Hickey, L. E. Roos, R. J. Giuliano, P. Fisher, T. Sharpton

The paper links gut microbiome composition to behavioral development in early school-aged children, showing associations with socioeconomic factors and specific taxa and functional modules.

bioRxiv · Mar 6, 2019Microbiology