Author

J. Foox

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Immunology· 2 Microbiology· 2 Cell Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 4 Research Focus:differential expression· 4 Organism:human· 4 Assay:bulk RNA-seq· 3 Approach:experimental assay· 3 Approach:statistical model· 3 Research Focus:gene regulatory network inference· 2 Assay:DNA methylation· 1

Frequent Co-Authors

C. Meydan· 4 shared D. Butler· 3 shared C. Mason· 2 shared C. Mozsary· 2 shared E. Afshinnekoo· 2 shared J. Kim· 2 shared J. Park· 2 shared M. MacKay· 2 shared

Activity by Year

2020-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 32 mutual co-author links

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4 shared papersImmunology

C. Meydan

Mutual co-authors in cluster

Author profile →

5 papers

Recent·Most cited

Lethal COVID-19 Associates With RAAS-Induced Inflammation For Multiple Organ Damage Including Mediastinal Lymph Nodes

J. W. Guarnieri, M. Topper, K. Beigel, J. A. Haltoom, A. Chadburn, J. Frere, J. An, H. Cope, A. Borczuk, S. Sinha, C. Lim, J. Kim, J. Park, C. Meydan, J. Foox, , K Clark

This study identifies non-canonical genes linked to RAAS overactivation in lethal COVID-19, causing multi-organ damage and mediastinal lymph node dysfunction.

bioRxiv · Oct 8, 2023 · PreprintImmunology

Cross-kingdom metagenomic profiling of Lake Hillier reveals pigment-rich polyextremophiles and wide-ranging metabolic adaptations

M. Sierra, K. Ryon, B. Tierney, J. Foox, C. Bhattacharya, E. Afshin, D. Butler, S. Green, K. Thomas, J. Ramsdell, N. Bivens, K. McGrath, C. Mason, S. W. Tighe

This study profiles the metagenome of Lake Hillier to identify pigment-producing microbes and their metabolic adaptations contributing to its pink color.

bioRxiv · Feb 17, 2022 · PreprintMicrobiology

Systemic Tissue and Cellular Disruption from SARS-CoV-2 Infection revealed in COVID-19 Autopsies and Spatial Omics Tissue Maps

J. Park, J. Foox, T. Hether, D. Danko, S. Warren, Y. Kim, J. Reeves, D. J. Butler, C. Mozsary, J. Rosiene, A. Shaiber, E. Afshinnekoo, M. MacKay, Y. Bram, V. Chandar, , Schwar

This study identifies systemic tissue and cellular disruption from SARS-CoV-2 infection using autopsy and spatial omics data, showing tissue-specific damage and transcriptional changes.

bioRxiv · Mar 8, 2021 · PreprintMicrobiology

Cell-free DNA (cfDNA) and exosome profiling from a year-long humanspaceflight reveals circulating biomarkers

D. Bezdan, K. Grigorev, C. Meydan, F. Pelissier Vatter, M. Ciofi, V. Rao, K. Nakahira, P. Burnham, E. Afshinnekoo, C. Westover, D. Butler, C. Moszary, M. MacKay, J. Foox, T. Mishra, , C. Mason

This study profiles cfDNA and exosomes from an astronaut during a year-long spaceflight, identifying increased cf-mtDNA and exosomal brain-derived peptides as potential biomarkers of spaceflight-related stress.

bioRxiv · Nov 8, 2020Cell Biology

Transcriptional response modules characterise IL-1β and IL-6 activity in COVID-19

L. C. K. Bell, C. Meydan, J. Kim, J. Foox, D. Butler, C. E. Mason, S. D. Shapira, M. Noursadeghi, G. Pollara

The paper identifies IL-1β and IL-6 transcriptional response modules in COVID-19 and finds they reflect cytokine bioactivity without correlating with disease severity.

bioRxiv · Jul 22, 2020Immunology