Author

J. M. Caldwell

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Ecology· 5 Immunology· 2

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:statistical model· 4 Research Focus:ecology & biodiversity· 3 Research Focus:cell type annotation· 2 Research Focus:host-pathogen & immune response· 2 Organism:human· 2 Research Focus:benchmarking· 1 Research Focus:database / resource· 1 Approach:deep learning· 1

Frequent Co-Authors

E. A. Mordecai· 3 shared M. E. Rothenberg· 2 shared M. J. Donahue· 2 shared M. Rochman· 2 shared S. F. Heron· 2 shared A. Anyamba· 1 shared A. D. LaBeaud· 1 shared A. Greene· 1 shared

Activity by Year

2018-2023 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 12 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

3 shared papersEcology

E. A. Mordecai

Mutual co-authors in cluster

Author profile →

7 papers

Recent·Most cited

Machine Learning Based Identification and Characterization of Mast Cells in Eosinophilic Esophagitis

S. Zhang, J. M. Caldwell, M. Rochman, M. H. Collins, M. E. Rothenberg

This paper uses machine learning to identify and characterize mast cells in eosinophilic esophagitis, finding spatially distinct populations and correlations with disease features.

bioRxiv · Oct 25, 2023Immunology

Multi-Factor Coral Disease Risk Forecasting for Early Warning and Management

J. M. Caldwell, G. Liu, E. Geiger, S. F. Heron, C. M. Eakin, J. De La Cour, A. Greene, L. Raymundo, J. Dryden, A. Schlaff, J. S. Stella, T. L. Kindinger, C. S. Couch, D. Fenner, W. Hoot, , M. J. Donahue

This paper develops a coral disease risk forecasting system using ecological and environmental data to predict disease risk in coral reefs, showing improved accuracy compared to previous systems.

bioRxiv · Oct 23, 2023 · PreprintEcology

Aryl Hydrocarbon Receptor Suppresses Eosinophilic Esophagitis Responses through OVOL1 and SPINK7

N. P. Azouz, A. M. Klingler, M. Rochman, M. Paul, J. M. Caldwell, M. Brusilovsky, A. T. Dwyer, X. P. Chen, D. Miller, A. Lynch, C. Forney, L. Kottyan, M. T. Weirauch, M. E. Rothenberg

This study identifies OVOL1 as a regulator of SPINK7 expression in eosinophilic esophagitis, showing AHR activation enhances SPINK7 and barrier function while IL-4 and IL-13 inhibit this pathway.

bioRxiv · May 17, 2023 · PreprintImmunology

Climate predicts geographic and temporal variation in mosquito-borne disease dynamics on two continents

J. M. Caldwell, A. D. LaBeaud, E. F. Lambin, A. M. Stewart-Ibarra, B. A. Ndenga, F. M. Mutuku, A. R. Krystosik, E. B. Ayala, A. Anyamba, M. J. Borbor-Cordova, R. Damoah, E. N. Grossi-Soyster, F. Heras Heras, H. N. Ngugi, S. J. Ryan, , E. A. Mordecai

The paper develops a climate-driven model to predict mosquito-borne disease dynamics in Ecuador and Kenya, showing it captures outbreak characteristics with variable accuracy.

bioRxiv · Feb 7, 2020Ecology

Case-control design identifies ecological drivers of endemic coral diseases

J. M. Caldwell, G. Aeby, S. F. Heron, M. J. Donahue

The paper uses a case-control study design to identify ecological factors driving two coral diseases, finding varying risk factors across species.

bioRxiv · Dec 19, 2019Ecology

Climate drives spatial variation in Zika epidemics in Latin America

M. J. Harris, J. M. Caldwell, E. A. Mordecai

This study assesses the role of climate in Zika virus transmission across Latin America, finding that climate factors explain spatial variation but not weekly transmission intensity.

bioRxiv · Jul 4, 2019Ecology

Seasonal temperature variation influences climate suitability for dengue, chikungunya, and Zika transmission

J. H. Huber, M. L. Childs, J. M. Caldwell, E. A. Mordecai

This study develops a dynamic transmission model to examine how seasonal temperature variation affects dengue, chikungunya, and Zika virus epidemics, finding that intermediate temperatures produce the largest epidemics.

bioRxiv · Apr 27, 2018Ecology