Author

J. P. Zehr

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Ecology· 3 Microbiology· 2

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 3 Approach:experimental assay· 3 Research Focus:gene regulatory network inference· 3 Assay:bulk RNA-seq· 2 Research Focus:chromatin & epigenetic regulation· 2 Research Focus:differential expression· 2 Assay:DNA methylation· 2 Research Focus:host-pathogen & immune response· 2

Frequent Co-Authors

M. d. C. Munoz-Marin· 2 shared A. C. Perez· 1 shared A. E. Ingalls· 1 shared A. E. White· 1 shared A. K. Boysen· 1 shared A. Vislova· 1 shared B. A. S. Van Mooy· 1 shared D. M. Karl· 1 shared

Activity by Year

2018-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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2 shared papersMicrobiology

M. d. C. Munoz-Marin

Mutual co-authors in cluster

Author profile →

5 papers

Recent·Most cited

Rapid mode switching facilitates the growth of Trichodesmium: A model analysis.

M. Gao, J. Andrews, G. Armin, S. Chakraborty, J. P. Zehr, K. Inomura

This study develops a metabolic model of Trichodesmium showing that rapid switching between photosynthetic and non-photosynthetic states enhances growth by improving metabolic efficiency.

bioRxiv · Jul 14, 2023Ecology

Discovery of Eremiobacterota with nifH homologs in tundra soil

I. S. Pessi, T. Delmont, J. P. Zehr, J. Hultman

The paper identifies a new Eremiobacterota population in tundra soil with nifH homologs and potential for N2 fixation, suggesting a role in nitrogen cycling.

bioRxiv · Jun 30, 2023 · PreprintMicrobiology

Open ocean and coastal strains of the N2-fixing cyanobacterium UCYN-A have distinct transcriptomes

M. d. C. Munoz-Marin, J. D. Magasin, J. P. Zehr

The paper compares transcriptomes of UCYN-A strains from open-ocean and coastal environments, finding distinct transcriptional activity and gene expression patterns.

bioRxiv · Jul 26, 2022 · PreprintMicrobiology

Community-scale Synchronization and Temporal Partitioning of Gene Expression, Metabolism, and Lipid Biosynthesis in Oligotrophic Ocean Surface Waters

D. Muratore, A. K. Boysen, M. J. Harke, K. W. Becker, J. R. Casey, S. N. Coesel, D. R. Mende, S. T. Wilson, F. O. Aylward, J. M. Eppley, A. Vislova, S. Peng, R. A. Rodriguez-Gonzalez, S. J. Beckett, E. V. Armbrust, , J. S. Weitz

The paper uses machine learning to analyze time series data from ocean surface waters, revealing synchronized and asynchronous gene expression patterns linked to diel cycles and microbial niche partitioning.

bioRxiv · May 15, 2020 · PreprintEcology

A transcriptional cycle suited to daytime N2 fixation in the unicellular cyanobacterium Candidatus Atelocyanobacterium thalassa (UCYN-A)

M. d. C. Munoz-Marin, I. Shilova, T. Shi, H. Farnelid, A. C. Perez, J. P. Zehr

This study identifies how UCYN-A coordinates N2 fixation with metabolism through distinct daily gene cycles, enabling daytime aerobic N2 fixation in a symbiotic relationship with a haptophyte.

bioRxiv · Nov 14, 2018Ecology