Author

J. Polak

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Immunology· 2 Biophysics· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 3 Approach:deep learning· 2 Organism:human· 2 Assay:scRNA-seq· 2 Approach:statistical model· 2 Research Focus:differential expression· 1 Research Focus:drug response / drug discovery· 1 Assay:metagenomics· 1

Frequent Co-Authors

I. Lindeman· 2 shared L. M. Sollid· 2 shared S.-W. Qiao· 2 shared A. Lossius· 1 shared C. Tempra· 1 shared C. Zhou· 1 shared D. Biriukov· 1 shared D. Ondo· 1 shared

Activity by Year

2020-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 19 mutual co-author links

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2 shared papersImmunology

I. Lindeman

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Effective Inclusion of Electronic Polarization Improves the Description of Electrostatic Interactions: The prosECCo75 Biomolecular Force Field

R. Nencini, C. Tempra, D. Biriukov, M. Riopedre-Fernandez, V. Cruces Chamorro, J. Polak, P. E. Mason, D. Ondo, J. Heyda, O. H. S. Ollila, P. Jungwirth, M. Javanainen, H. Martinez-Seara

prosECCo75 improves MD simulations by incorporating electronic polarization, enhancing accuracy in modeling electrostatic interactions in biological systems without increasing computational cost.

bioRxiv · May 31, 2024Biophysics

Stereotyped B-cell responses are linked to IgG constant region polymorphisms in multiple sclerosis

I. Lindeman, J. Polak, S.-W. Qiao, T. Holmoy, R. A. Hoglund, F. Vartdal, P. Berg-Hansen, L. M. Sollid, A. Lossius

This study links IgG constant region polymorphisms to stereotyped B-cell responses in multiple sclerosis by analyzing clonal relationships and isotype distributions in intrathecal B-lineage cells.

bioRxiv · Apr 23, 2021Immunology

Longevity, clonal relationship and transcriptional program of celiac disease-specific plasma cells

I. Lindeman, C. Zhou, L. M. Eggesbo, Z. Miao, J. Polak, K. E. Lundin, J. Jahnsen, S.-W. Qiao, R. Iversen, L. M. Sollid

The paper analyzes single-cell RNA-seq data from plasma cells in celiac disease patients to identify transcriptional differences and clonal relationships between disease-specific and non-specific plasma cells.

bioRxiv · Apr 30, 2020Immunology