Author

Jerome Bouquet

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 2

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 2 Approach:experimental assay· 2 Assay:metagenomics· 2 Research Focus:benchmarking· 1 Research Focus:database / resource· 1 Approach:deep learning· 1 Research Focus:drug response / drug discovery· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Charles Y Chiu· 2 shared Samia N Naccache· 2 shared Scot FedermaniD· 2 shared Alex L Greninger· 1 shared Alexander L Greninger· 1 shared Bette K Klenschmidt-DeMasters· 1 shared Bradley Schneider· 1 shared Carol Glaser· 1 shared

Activity by Year

2015-2015 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 35 mutual co-author links

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2 shared papersGenomics

Charles Y Chiu

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2 papers

Recent·Most cited

Clinical metagenomic identification of Balamuthia mandrillaris encephalitis and assembly of the draft genome: the critical need for reference strain sequencing

Alexander L Greninger, Kevin Messacar, Thelma Dunnebacke-Dixon, Samia N Naccache, Scot Federman, Jerome Bouquet, David Mirsky, Yosuke Nomura, Shigeo Yagi, Carol Glaser, Michael Vollmer, Craig A. Press, Bette K Klenschmidt-DeMasters, Samuel R Dominguez, Charles Y Chiu

The paper reports the first draft genome assembly of Balamuthia mandrillaris from a PAM survivor and highlights the need for reference genomes in metagenomic diagnosis.

Genome Medicine · Dec 1, 2015Peer-reviewedGenomics

Rapid metagenomic identification of viral pathogens in clinical samples by real-time nanopore sequencing analysis

Alex L Greninger, Samia N Naccache, Scot Federman, Guixia Yu, Placide Mbala, Vanessa Bres, Jerome Bouquet, Doug Stryke, Sneha Somasekar, Jeffrey Linnen, Roger Dodd, Prime Mulembakani, Bradley Schneider, Jean-Jacques Muyembe, Susan Stramer, Charles Y Chiu

This study uses real-time nanopore sequencing and a new pipeline to rapidly detect viral pathogens in clinical samples with high accuracy.

Genome Medicine · Sep 29, 2015Peer-reviewedGenomics