Author

K. Shibayama

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 7

Signature Assays, Organisms & Methods

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Approach:experimental assay· 7 Assay:whole-genome sequencing· 4 Organism:bacteria (other)· 3 Research Focus:host-pathogen & immune response· 3 Organism:human· 3 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Research Focus:chromatin & epigenetic regulation· 1

Frequent Co-Authors

A. Hirabayashi· 6 shared M. Suzuki· 5 shared F. Hasebe· 3 shared H. H. Tran· 3 shared I. Kasuga· 3 shared K. Yahara· 3 shared L. T. Trang· 3 shared T. D. Dao· 3 shared

Activity by Year

2020-2022 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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6 shared papersMicrobiology

A. Hirabayashi

Mutual co-authors in cluster

Author profile →

7 papers

Recent·Most cited

Characterization of HcaA, a novel autotransporter protein in Helicobacter cinaedi, and its role in host cell adhesion

S. Aoki, S. Mori, H. Matsui, K. Shibayama, T. Kenri, E. Rimbara

This study identifies HcaA, a novel autotransporter protein in H. cinaedi, as critical for host cell adhesion and bacterial colonization through its RGD motif.

bioRxiv · Nov 18, 2022 · PreprintMicrobiology

Strand-biased circularizing integrative elements spread tmexCD-toprJ gene clusters encoding RND-type multidrug efflux pumps by repeated transpositions

T. D. Dao, H. Yano, T. Takemura, A. Hirabayashi, L. T. Trang, H. H. Tran, K. Shibayama, F. Hasebe, I. Kasuga, M. Suzuki

The paper identifies a mobile genetic element, SE, that mediates the spread of tmexCD-toprJ gene clusters encoding RND-type multidrug efflux pumps through transposition in bacteria.

bioRxiv · Sep 22, 2022 · PreprintMicrobiology

Emergence of plasmid-mediated RND-type efflux pump gene cluster tmexCD-toprJ in Shewanella xiamenensis in a water environment

T. D. Dao, T. Takemura, I. Kasuga, A. Hirabayashi, N. T. Nga, P. H. Q. Anh, N. D. Tu, L. T. Trang, H. H. Tran, K. Shibayama, F. Hasebe, M. Suzuki

This study identifies a mobile RND-type efflux pump gene cluster tmexCD-toprJ in Shewanella xiamenensis from a water environment, contributing to multidrug resistance.

bioRxiv · Sep 15, 2022 · PreprintMicrobiology

A transferable IncC-IncX3 hybrid plasmid co-carrying blaNDM-4, tet(X4), and tmexCD3-toprJ3 confers resistance to carbapenem and tigecycline

A. Hirabayashi, T. D. Dao, T. Takemura, F. Hasebe, L. T. Trang, N. H. Thanh, H. H. Tran, K. Shibayama, I. Kasuga, M. Suzuki

The paper identifies a multidrug-resistant plasmid in Klebsiella aerogenes that carries genes for carbapenem and tigecycline resistance and shows its potential for global spread.

bioRxiv · Jun 30, 2021Microbiology

On-site genomic epidemiological analysis of antimicrobial-resistant bacteria in Cambodia with portable laboratory equipment

A. Hirabayashi, H. Yanagisawa, H. Takahashi, K. Yahara, P. Boeing, B. Wolfenden, V. Nov, V. Lorn, M. Veng, V. Ann, C. Darapheak, K. Shibayama, M. Suzuki

This study uses portable lab equipment to analyze antimicrobial-resistant bacteria in Cambodia, identifying specific resistance genes and their plasmid locations.

bioRxiv · Mar 3, 2021Microbiology

Comparison of de-duplication methods used by WHO Global Antimicrobial Resistance Surveillance System (GLASS) and Japan Nosocomial Infections Surveillance (JANIS) in the surveillance of antimicrobial resistance

T. Kajihara, K. Yahara, J. Stelling, S. R. Eremin, B. Tornimbene, V. Thamlikitkul, A. Hirabayashi, E. Anzai, T. Wakai, N. Matsunaga, K. Hayakawa, N. Ohmagari, M. Sugai, K. Shibayama

This study compares de-duplication methods from WHO GLASS and JANIS systems for AMR surveillance, finding small differences in patient counts and resistance percentages for E. coli.

PLOS ONE · Jun 26, 2020Peer-reviewedMicrobiology

Plasmid analysis of NDM metallo-β-lactamase-producing Enterobacterales isolated in Vietnam

A. Hirabayashi, K. Yahara, S. Mitsuhashi, S. Nakagawa, T. Imanishi, V. T. T. Ha, A. V. Nguyen, S. T. Nguyen, K. Shibayama, M. Suzuki

The paper characterizes blaNDM-1-carrying plasmids in Vietnamese Enterobacterales isolates, identifying horizontal plasmid transfer and resistance gene co-occurrence.

bioRxiv · Mar 18, 2020 · PreprintMicrobiology