Author

K. Waugh

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioengineering· 1 Immunology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Research Focus:host-pathogen & immune response· 1 Organism:human· 1 Approach:machine learning (classical)· 1

Frequent Co-Authors

A.-M. Liebhoff· 1 shared B. Langmead· 1 shared B. Tamburini· 1 shared C. Morrison· 1 shared C. Sempeck· 1 shared D. Orlicky· 1 shared H. B. Larman· 1 shared I. Ruczinski· 1 shared

Activity by Year

2020-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperBioengineering

A.-M. Liebhoff

Mutual co-authors in cluster

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2 papers

Recent·Most cited

Efficient encoding of large antigenic spaces by epitope prioritization with Dolphyn

A.-M. Liebhoff, T. Venkataraman, W. R. Morgenlander, M. Na, T. Kula, K. Waugh, C. Morrison, M. Rewers, R. Longman, J. Round, S. Elledge, I. Ruczinski, B. Langmead, H. B. Larman

The paper develops Dolphyn, a machine learning method to improve PhIP-Seq by prioritizing epitopes, increasing antibody-bound peptides from 10% to 31% and reducing synthesized peptides by 78%.

bioRxiv · Jul 30, 2023Bioengineering

JAK1 inhibition blocks lethal sterile immune responses:implications for COVID-19 therapy

K. Tuttle, R. Minter, K. Waugh, P. Araya, M. Ludwig, C. Sempeck, K. Smith, Z. Andrysik, M. Burchill, B. Tamburini, D. Orlicky, K. D. Sullivan, J. Espinosa

JAK1 inhibition prevents lethal immune responses and organ failure in a mouse model of Down syndrome and viral infection.

bioRxiv · Apr 7, 2020Immunology