Author

Kirsten Wade

University of Pittsburgh

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 1 Neuroscience· 1

Signature Assays, Organisms & Methods

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Assay:ATAC-seq· 1 Research Focus:cell type annotation· 1 Assay:electronic health records· 1 Approach:experimental assay· 1 Approach:machine learning (classical)· 1 Organism:mouse· 1 Organism:rat· 1 Research Focus:software / tool· 1

Frequent Co-Authors

Kenneth N. FishiD· 2 shared William R. StaufferiD· 2 shared Alyssa J. LawleriD· 1 shared Andreas R. PfenningiD· 1 shared Ashley R. BrowniD· 1 shared BaDoi N. PhaniD· 1 shared Bilge Esin ÖztürkiD· 1 shared David A. LewisiD· 1 shared

Activity by Year

2022-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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2 shared papersNeuroscience

Kenneth N. FishORCID

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2 papers

Recent·Most cited

Synaptic alterations in pyramidal cells following genetic manipulation of neuronal excitability in monkey prefrontal cortex

Guillermo González‐Burgos, Takeaki Miyamae, Yosuke Nishihata, Olga L Krimer, Kirsten Wade, Kenneth N. Fish, Dominique Arion, Zhao‐Lin Cai, Mingshan Xue, William R. Stauffer, David A. Lewis

This study reduces neuronal excitability in monkey prefrontal cortex using Kir2.1 channels and finds decreased excitatory synaptic strength without affecting inhibitory inputs.

Journal of Neurophysiology · Dec 31, 2024Peer-reviewedNeuroscience

Machine learning sequence prioritization for cell type-specific enhancer design

Alyssa J. Lawler, Easwaran Ramamurthy, Ashley R. Brown, Naomi Shin, Yeonju Kim, Noelle Toong, Irene M. Kaplow, Morgan E. Wirthlin, Xiaoyu Zhang, BaDoi N. Phan, Grant A Fox, Kirsten Wade, Jing He, Bilge Esin Öztürk, Leah C. Byrne, , Andreas R. Pfenning

The paper introduces SNAIL, a virus-based method using machine learning to design cell type-specific enhancer probes for targeted nuclear isolation and characterization.

eLife · Apr 25, 2022Peer-reviewedGenomics