Author

M. Alfaki

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 3 Research Focus:cell type annotation· 3 Organism:human· 3 Research Focus:differential expression· 2 Research Focus:gene regulatory network inference· 2 Research Focus:cell-cell communication· 1 Research Focus:clustering· 1 Approach:experimental assay· 1

Frequent Co-Authors

D. Bedognetti· 3 shared D. Chaussabel· 3 shared D. Rinchai· 3 shared M. Garand· 3 shared M. Toufiq· 3 shared N. Baldwin· 2 shared A. A. Benitez· 1 shared A. Ballestrero· 1 shared

Activity by Year

2018-2020 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 41 mutual co-author links

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3 shared papersImmunology

D. Bedognetti

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Author profile →

3 papers

Recent·Most cited

A modular framework for the development of targeted Covid-19 blood transcript profiling panels

D. Rinchai, B. Kabeer, M. Toufiq, Z. Calderone, S. Deola, T. Brummaier, M. Garand, R. Branco, N. Baldwin, M. Alfaki, M. Altman, A. Ballestrero, M. Bassetti, G. Zoppoli, A. De Maria, , D. Chaussabel

The paper develops a modular framework for designing targeted blood transcript profiling panels to study the immune response to SARS-CoV-2 infection.

bioRxiv · May 20, 2020Immunology

Development and Characterization of a Fixed Repertoire of Blood Transcriptome Modules Based on Co-expression Patterns Across Immunological States

M. C. Altman, D. Rinchai, N. Baldwin, M. Toufiq, E. Whalen, M. Garand, B. A. Kabeer, M. Alfaki, S. Presnell, P. Khaenam, A. A. Benitez, F. Mougin, P. Thebault, L. Chiche, N. Jourde-Chiche, , D. Chaussabel

The paper develops a fixed repertoire of blood transcriptome modules based on co-expression patterns across immunological states to provide a stable framework for analyzing and interpreting blood transcriptome data.

bioRxiv · Apr 28, 2020Immunology

The abundance of Nudix hydrolase 16 transcripts is elevated in human sepsis: perspectives gained during a hands-on reductionist investigation workshop.

M. Garand, D. Rinchai, B. S. A. Kabeer, M. Toufiq, M. Alfaki, J. Roelands, W. Hendrickx, S. Boughorbel, N. Marr, D. Bedognetti, D. Chaussabel

The paper investigates NUDT16 transcript abundance in sepsis using omics data and public datasets, finding elevated levels in septic patients compared to controls.

bioRxiv · Dec 9, 2018 · PreprintImmunology