Author

M. Anjum

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 2

Signature Assays, Organisms & Methods

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Organism:E. coli· 1 Approach:experimental assay· 1 Assay:metagenomics· 1 Approach:statistical model· 1 Research Focus:variant effect prediction· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

A. S. Walker· 2 shared D. W. Crook· 2 shared J. Swann· 2 shared M. Abuoun· 2 shared N. Stoesser· 2 shared A. E. Sheppard· 1 shared A. Mathers· 1 shared A. T. M. Hubbard· 1 shared

Activity by Year

2019-2020 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 41 mutual co-author links

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2 shared papersMicrobiology

A. S. Walker

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2 papers

Recent·Most cited

Reconciling the potentially irreconcilable? Genotypic and phenotypic amoxicillin-clavulanate resistance in Escherichia coli

T. J. Davies, N. Stoesser, A. E. Sheppard, M. Abuoun, P. W. Fowler, J. Swann, P. Quan, D. Griffiths, A. Vaughan, M. Morgan, H. T. T. Phan, K. J. Jeffery, M. Andersson, M. Ellington, O. Ekelund, , A. S. Walker

This study shows that amoxicillin-clavulanate resistance in E. coli is quantitative, not binary, and that WGS-based predictions outperform traditional phenotyping methods.

bioRxiv · Feb 6, 2020Microbiology

The impact of sequencing depth on the inferred taxonomic composition and AMR gene content of metagenomic samples

H. S. Gweon, L. P. Shaw, J. Swann, N. De Maio, M. AbuOun, A. T. M. Hubbard, M. J. Bowes, M. J. Bailey, T. E. A. Peto, S. J. Hoosdally, A. S. Walker, R. P. Sebra, D. W. Crook, M. Anjum, D. S. Read, , The REHAB consortium

This study evaluates how sequencing depth affects taxonomic composition and AMR gene detection in metagenomic samples, finding that higher depth is needed for AMR gene richness.

bioRxiv · Mar 31, 2019Microbiology