Author

M. de Raad

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Microbiology· 4 Plant Biology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Assay:metabolomics· 4 Research Focus:cell type annotation· 3 Approach:experimental assay· 3 Organism:bacteria (other)· 2 Research Focus:differential expression· 2 Research Focus:cell-cell communication· 1 Research Focus:clustering· 1 Approach:comparative / phylogenetic analysis· 1

Frequent Co-Authors

T. Northen· 3 shared B. P. Bowen· 2 shared K. Zhalnina· 2 shared R. Chakraborty· 2 shared S. M. Kosina· 2 shared T. R. Northen· 2 shared A. Golini· 1 shared A. M. Deutschbauer· 1 shared

Activity by Year

2019-2022 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

3 shared papersMicrobiology

T. Northen

Mutual co-authors in cluster

Author profile →

5 papers

Recent·Most cited

Metabolic traits and the niche of bulk soil bacteria in a Mediterranean grassland

K. Zhalnina, R. A. White, M. de Raad, K. Deng, C. D. Nicora, U. Karaoz, J. Pett-Ridge, M. Firestone, M. S. Lipton, T. Northen, E. L. Brodie

This study compares metabolic traits of bulk soil and rhizosphere bacteria in a Mediterranean grassland, finding bulk soil bacteria better adapted to degrade plant polymers.

bioRxiv · Jun 21, 2022 · PreprintMicrobiology

Biofilm Interaction Mapping and Analysis (BIMA): A tool for deconstructing interspecific interactions in co-culture biofilms

S. M. Kosina, P. Rademacher, K. M. Wetmore, M. de Raad, M. Zemla, G. M. Zane, J. J. Zulovich, R. Chakraborty, B. P. Bowen, J. D. Wall, M. Auer, A. P. Arkin, A. M. Deutschbauer, T. R. Northen

The paper introduces BIMA, a method to analyze interspecific interactions in biofilm co-cultures by examining colony morphology, inhibition, invasion, and associated genes/metabolites.

bioRxiv · Aug 3, 2021Microbiology

A defined medium based on R2A for cultivation and exometabolite profiling of soil bacteria

M. de Raad, Y. Li, P. Andeer, S. M. Kosina, N. R. Saichek, A. Golini, L. Z. Han, Y. Wang, B. P. Bowen, R. Chakraborty, T. R. Northen

The paper develops a defined medium (NLDM) for cultivating soil bacteria and profiling exometabolites, showing it supports growth of 53 diverse isolates and enables metabolite tracking via LC-MS/MS.

bioRxiv · May 23, 2021 · PreprintMicrobiology

Cervicovaginal microbiome composition drives metabolic profiles in healthy pregnancy

A. Oliver, B. LaMere, C. Weihe, S. Wandro, K. Lindsay, P. Wadhwa, D. Mills, D. T. Pride, O. Fiehn, T. Northen, M. de Raad, H. Li, J. B. H. Martiny, S. Lynch, K. Whiteson

The paper investigates how cervicovaginal microbiome composition influences metabolic profiles in healthy pregnancies across trimesters and the first year of life.

bioRxiv · Nov 13, 2019Microbiology

Root morphology and exudate availability is shaped by particle size and chemistry in Brachypodium distachyon

J. Sasse Schlaepfer, J. Jordan, M. De Raad, K. Whiting, K. Zhalnina, T. Northen

This study shows root morphology is affected by substrate size, but exudation is not, and exudate availability depends on substrate chemistry.

bioRxiv · May 27, 2019Plant Biology