Author

M. J. Bonder

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Cell Biology· 2 Cancer Biology· 1 Immunology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Assay:DNA methylation· 3 Research Focus:gene regulatory network inference· 3 Organism:human· 3 Research Focus:cell type annotation· 2 Research Focus:chromatin & epigenetic regulation· 2 Approach:deep learning· 2 Research Focus:differential expression· 2 Assay:scRNA-seq· 2

Frequent Co-Authors

O. Stegle· 3 shared F. Krueger· 2 shared S. Clark· 2 shared A. Arutyunyan· 1 shared A. Ernst· 1 shared A. Kurilshikov· 1 shared A. Leger· 1 shared A. M. Hashtroud· 1 shared

Activity by Year

2021-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 15 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

3 shared papersCell Biology

O. Stegle

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

Single cell DNA methylation ageing in mouse blood

M. J. Bonder, S. Clark, F. Krueger, S. Luo, J. Agostinho de Sousa, A. M. Hashtroud, T. M. Stubbs, A.-K. Stark, S. Rulands, O. Stegle, W. Reik, F. von Meyenn

This study develops a single-cell DNA methylation age predictor using a large multi-omics dataset from mouse blood, revealing epigenetic age heterogeneity and differences across blood cell types.

bioRxiv · Jan 30, 2023 · PreprintCell Biology

Long-read sequencing of diagnosis and post-therapy medulloblastoma reveals complex rearrangement patterns and epigenetic signatures

T. Rausch, R. Snajder, A. Leger, M. Simovic, O. Stegle, E. Birney, M. J. Bonder, A. Ernst, J. O. Korbel

This study uses long-read sequencing to analyze medulloblastoma genomes and epigenomes, revealing complex structural variants and methylation patterns.

bioRxiv · Feb 20, 2022Cancer Biology

Single-Cell Atlas of Common Variable Immunodeficiency reveals germinal center-associated epigenetic dysregulation in B cell responses

J. Rodriguez-Ubreva, A. Arutyunyan, M. J. Bonder, L. Del Pino-Molina, S. Clark, C. de la Calle-Fabregat, L. Garcia-Alonso, L.-F. Handfield, L. Ciudad, E. Andres-Leon, F. Krueger, F. Catala-Moll, V. C. Rodriguez-Cortez, K. Polanski, L. Mamanova, , E. Ballestar

The paper creates a single-cell atlas of CVID, identifying epigenetic and transcriptional defects in memory B cells and linking them to impaired cell communication.

bioRxiv · Dec 20, 2021 · PreprintImmunology

Genetic, parental and lifestyle factors influence telomere length

S. Andreu-Sanchez, G. Aubert, A. Ripoll-Cladellas, S. Henkelman, D. V. Zhernakova, T. Sinha, A. Kurilshikov, M. C. Cenit, M. J. Bonder, Lifelines cohort study, L. Franke, C. Wijmenga, J. Fu, M. G. P. van der Wijst, M. Mele, , A. Zhernakova

This study identifies factors influencing telomere length across blood cell types, showing genetic, parental, and lifestyle effects, with maternal age's impact mediated by epigenetics.

bioRxiv · Dec 14, 2021Cell Biology