Author
Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.
8 papers
Recent·Most cited
S. Garmaeva, T. Sinha, A. Gulyaeva, N. Kuzub, J. E. Spreckels, S. Andreu-Sanchez, R. Gacesa, A. Vich Vila, S. Brushett, M. Kruk, J. Dekens, J. Sikkema, F. Kuipers, A. Shkoporov, C. Hill, , A. Zhernakova
bioRxiv · Aug 21, 2023Microbiology
A. Gulyaeva, S. Garmaeva, A. Kurilshikov, A. Vich Vila, N. P. Riksen, M. G. Netea, R. K. Weersma, J. Fu, A. Zhernakova
The paper identifies and characterizes Caudoviricetes phages with genome terminal repeats in fecal metagenomes, finding 1,899 species-level units and 34 associations between phages and human phenotypes.
bioRxiv · Sep 2, 2022Microbiology
S. Andreu-Sanchez, G. Aubert, A. Ripoll-Cladellas, S. Henkelman, D. V. Zhernakova, T. Sinha, A. Kurilshikov, M. C. Cenit, M. J. Bonder, Lifelines cohort study, L. Franke, C. Wijmenga, J. Fu, M. G. P. van der Wijst, M. Mele, , A. Zhernakova
This study identifies factors influencing telomere length across blood cell types, showing genetic, parental, and lifestyle effects, with maternal age's impact mediated by epigenetics.
bioRxiv · Dec 14, 2021Cell Biology
A. R. Bourgonje, S. Andreu-Sanchez, T. Vogl, S. Hu, A. V. Vila, R. Gacesa, S. Leviatan, A. Kurilshikov, S. Klompus, I. N. Kalka, H. M. van Dullemen, A. Weinberger, M. C. Visschedijk, E. A. M. Festen, K. N. Faber, , R. K. Weersma
This study identifies distinct antibody epitope repertoires in IBD patients using PhIP-seq, revealing differentially abundant antibodies associated with disease subtypes and features.
bioRxiv · Dec 7, 2021Immunology
S. Andreu-Sanchez, A. R. Bourgonje, T. Vogl, A. Kurilshikov, S. Leviatan, A. J. Ruiz Moreno, S. Hu, T. Sinha, A. Vich Vila, S. Klompus, I. Kalka, K. de Leeuw, S. Arends, I. H. Jonkers, S. Withoff, , A. Zhernakova
This study uses PhIP-Seq to analyze antibody repertoires in 1,443 individuals, showing genetic and environmental factors influence antibody diversity and phenotype associations.
bioRxiv · Dec 7, 2021Immunology
A. Gulyaeva, S. Garmaeva, R. A. A. A. Ruigrok, D. Wang, N. P. Riksen, M. G. Netea, C. Wijmenga, R. K. Weersma, J. Fu, A. Vich Vila, A. Kurilshikov, A. Zhernakova
The paper discovers new crAss-like phage species and explores their diversity, genomic features, host associations, and links to human health phenotypes in Dutch gut metagenomes.
bioRxiv · Jun 1, 2021Microbiology
R. Gacesa, A. Kurilshikov, A. Vich Vila, T. Sinha, M. A. Y. Klaassen, L. A. Bolte, S. Andreu-Sanchez, L. Chen, V. Collij, S. Hu, J. A. M. Dekens, V. C. Lenters, J. R. Bjork, J. C. Swarte, M. A. Swertz, , R. K. Weersma
This study identifies environmental and lifestyle factors shaping the gut microbiome in a large Dutch cohort, finding that most microbiome variation is due to environment rather than genetics.
bioRxiv · Nov 27, 2020 · PreprintMicrobiology
R. Edwards, A. Vega, H. Norman, M. C. Ohaeri, K. Levi, E. Dinsdale, O. Cinek, R. Aziz, K. McNair, J. Barr, K. Bibby, S. Brouns, A. Cazares, P. A. de Jonge, C. Desnues, , Doane
This study investigates the origin, evolution, and epidemiology of crAssphage, a widespread human gut virus, using global DNA sequences showing local phylogeographic clustering and ancient primate associations.
bioRxiv · Jan 26, 2019Microbiology