Author

Maggie S. Chen

Lawrence Berkeley National Laboratory

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Developmental Biology· 1 Genetic & Genomic Medicine· 1

Signature Assays, Organisms & Methods

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Assay:scRNA-seq· 2 Research Focus:cell type annotation· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Organism:mouse· 1

Frequent Co-Authors

J EngreitziD· 2 shared Kristy Red‐HorseiD· 2 shared Thomas QuertermousiD· 2 shared Alina IsakovaiD· 1 shared Anshul Bharat KundajeiD· 1 shared Arun PadmanabhaniD· 1 shared Axel ViseliD· 1 shared Brian C. Raftrey· 1 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 35 mutual co-author links

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2 shared papersDevelopmental Biology

J EngreitzORCID

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2 papers

Recent·Most cited

A Perturb-seq screen guided by species divergence uncovers pathways for collateral artery formation

Xiaochen Fan, Ronghao Zhou, Brian C. Raftrey, Pamela E. Rios Coronado, Emily Trimm, Erin Clancy, Xinhong Chen, Jamie Bozeman, Maggie S. Chen, Shoxruxxon Alimukhamedov, Juan Alcocer, Idalina Bonham, Stuti Agarwal, Alina Isakova, Vinicio de Jesús Pérez, , Kristy Red‐Horse

The paper uses Perturb-seq in mice to identify genes that promote collateral artery formation by comparing gene expression between guinea pigs and mice.

bioRxiv · May 10, 2026 · PreprintDevelopmental Biology

Interpreting variants associated with congenital heart disease with a regulatory map of the human fetal heart

X. Rosa Ma, Stephanie D. Conley, Maggie S. Chen, Michael Kosicki, Yifan Lu, Danila Bredikhin, Ran Cui, Maya U. Sheth, Wei‐Lin Qiu, Dulguun Amgalan, Sijie Chen, Robin M. Perelli, Neil Slaven, Michael T. Montgomery, Sarah Fan Xia, , J Engreitz

This study creates a gene regulation map of the human fetal heart to interpret genetic variants associated with congenital heart disease and cardiac traits, identifying valvular interstitial cells as key regulators.

medRxiv · Nov 20, 2024 · PreprintGenetic & Genomic Medicine